RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 GYG1P46976 350 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ARSEP51690 589 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GNG2P59768 71 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 MRPS22P82650 360 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 FMO1Q01740 532 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GALNT1Q10472 559 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PMS2P3Q13401 168 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SELPLGQ14242 412 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PPP2R5DQ14738 602 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PPM1LQ5SGD2 360 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 TMTC4Q5T4D3 741 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 TTC39BQ5VTQ0 682 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SUSD4Q5VX71 490 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 POTEBQ6S5H4 581 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PLEKHG7Q6ZR37 379 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GSTA5Q7RTV2 222 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 UBR7Q8N806 425 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 OR13F1Q8NGS4 319 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 GIPC2Q8TF65 315 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SDCCAG3Q96C92 435 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 RMDN1Q96DB5 314 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SH3YL1Q96HL8 342 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 UIMC1Q96RL1 719 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 P2RX7Q99572 595 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 C17orf80Q9BSJ5 609 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 RUSC1Q9BVN2 902 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 C20orf27Q9GZN8 174 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 HMG20AQ9NP66 347 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CHORDC1Q9UHD1 332 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PCDHGA3Q9Y5H0 932 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SIP14410 1827 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ARHGEF35A5YM69 484 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 FADS2P1A8MWK0 482 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF195O14628 629 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ACOT8O14734 319 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SLITRK3O94933 977 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 NAT2P11245 290 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 NAGAP17050 411 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ENPP1P22413 925 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 SSTR1P30872 391 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PSMD8P48556 350 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 TPTEP56180 551 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 NFE2Q16621 373 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ATAD3BQ5T9A4 648 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 FAXCQ5TGI0 409 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PDPK2PQ6A1A2 396 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ACAD10Q6JQN1 1059 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CDHR3Q6ZTQ4 885 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 LACC1Q8IV20 430 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 NUDCD3Q8IVD9 361 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 KSR1Q8IVT5 923 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PPIL6Q8IXY8 311 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 NAT8LQ8N9F0 302 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 PDCD6IPQ8WUM4 868 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 LENG9Q96B70 501 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 DYNLL2Q96FJ2 89 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CNDP1Q96KN2 507 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 ZNF778Q96MU6 729 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 KLF6Q99612 283 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CLPBQ9H078 707 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 RNF38Q9H0F5 515 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 DUS2Q9NX74 493 aaKnown RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.35□□□□□ -1.07
CSDE1-214ENST00000530886 TBC1D14Q9P2M4 693 aa8.35□□□□□ -1.07
CSDE1-214ENST00000530886 LRRIQ4A6NIV6 560 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 TSPY2A6NKD2 308 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PSMD11O00231 422 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 HTRA2O43464 458 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 B4GALT4O60513 344 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 RNASEH2AO75792 299 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 BCL10O95999 233 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 C7P10643 843 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 CRHR1P34998 444 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 IDUAP35475 653 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 NUDT1P36639 197 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 IDH3AP50213 366 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 GPS1Q13098 491 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 C15orf59Q2T9L4 293 aaPredicted RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PLA2G4FQ68DD2 849 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 AKAP14Q86UN6 197 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SLC9A9Q8IVB4 645 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 RAB2BQ8WUD1 216 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PIGSQ96S52 555 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 EFHD1Q9BUP0 239 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 HERC2P3Q9BVR0 1158 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 SLC7A5P2Q9GIP4 190 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 COQ10BQ9H8M1 238 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 CYP4F11Q9HBI6 524 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 ZMAT5Q9UDW3 170 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 HAT1O14929 419 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 NOL3O60936 208 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 CCDC159P0C7I6 412 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 GAP43P17677 238 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 MAPK4P31152 587 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 LEPRP48357 1165 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 NLRP11P59045 1033 aaKnown RBP8.34□□□□□ -1.07
CSDE1-214ENST00000530886 PRKCQQ04759 706 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 INAVAQ3KP66 663 aa8.34□□□□□ -1.07
CSDE1-214ENST00000530886 LRIT3Q3SXY7 679 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms