RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TFF2Q03403 129 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 DDX10Q13206 875 aaKnown RBP8.19□□□□□ -1.1
CSDE1-213ENST00000530784 SEMA5AQ13591 1074 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 TMEM119Q4V9L6 283 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 SPARTQ8N0X7 666 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 DNAJB14Q8TBM8 379 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 CELF1Q92879 486 aaKnown RBP8.19□□□□□ -1.1
CSDE1-213ENST00000530784 ABHD8Q96I13 439 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 MACROD1Q9BQ69 325 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 HYPKQ9NX55 129 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 PGAP2Q9UHJ9 254 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 CNOT7Q9UIV1 285 aaKnown RBP8.19□□□□□ -1.1
CSDE1-213ENST00000530784 GABRQQ9UN88 632 aa8.19□□□□□ -1.1
CSDE1-213ENST00000530784 DDX60Q8IY21 1712 aaKnown RBP8.18□□□□□ -1.1
CSDE1-213ENST00000530784 LOC102723971A0A1B0GUV8 181 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 H7C4K7 107 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 CA12O43570 354 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 NPSP0C0P6 89 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 CTGFP29279 349 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 TPTEP56180 551 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 CYP4F2P78329 520 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 INSCQ1MX18 579 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 CACHD1Q5VU97 1274 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 NAPRTQ6XQN6 538 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 ZNF804AQ7Z570 1209 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 EYA3Q99504 573 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 DBNDD1Q9H9R9 158 aa8.18□□□□□ -1.1
CSDE1-213ENST00000530784 DNMT3BQ9UBC3 853 aaKnown RBP8.18□□□□□ -1.1
CSDE1-213ENST00000530784 PSMD14O00487 310 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 ECE2O60344 883 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 TJP3O95049 919 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 RASAL1O95294 804 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 PARNO95453 639 aaKnown RBP8.17□□□□□ -1.1
CSDE1-213ENST00000530784 IL1R1P14778 569 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 RPS12P25398 132 aaKnown RBP8.17□□□□□ -1.1
CSDE1-213ENST00000530784 CALD1Q05682 793 aaKnown RBP8.17□□□□□ -1.1
CSDE1-213ENST00000530784 CCNIQ14094 377 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 NPY5RQ15761 445 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 CYP1B1Q16678 543 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 CERCAMQ5T4B2 595 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 DPY19L3Q6ZPD9 716 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 DPCDQ9BVM2 203 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-213ENST00000530784 HDAC9Q9UKV0 1011 aa8.17□□□□□ -1.1
CSDE1-213ENST00000530784 SRGAP2O75044 1071 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 PDE8BO95263 885 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 COL4A1P02462 1669 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 PRKCGP05129 697 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 NHLRC4P0CG21 123 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-213ENST00000530784 PTDSS1P48651 473 aaKnown RBP8.16□□□□□ -1.1
CSDE1-213ENST00000530784 ITGA8P53708 1063 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 RPS8P62241 208 aaKnown RBP8.16□□□□□ -1.1
CSDE1-213ENST00000530784 DGKHQ86XP1 1220 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 RTL9Q8NET4 1388 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 ABHD11Q8NFV4 315 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 TBC1D16Q8TBP0 767 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 DCPSQ96C86 337 aaKnown RBP8.16□□□□□ -1.1
CSDE1-213ENST00000530784 LENG8Q96PV6 779 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-213ENST00000530784 TRPM7Q96QT4 1865 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 APOL5Q9BWW9 433 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 TRIM5Q9C035 493 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 CHST8Q9H2A9 424 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 POLLQ9UGP5 575 aa8.16□□□□□ -1.1
CSDE1-213ENST00000530784 CGB1A6NKQ9 187 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 AP4M1O00189 453 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 CCP110O43303 1012 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 RGS10O43665 173 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 RRP9O43818 475 aaKnown RBP8.15□□□□□ -1.1
CSDE1-213ENST00000530784 UFL1O94874 794 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 DLDP09622 509 aaKnown RBP8.15□□□□□ -1.1
CSDE1-213ENST00000530784 ZNF853P0CG23 659 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 PRKAR1BP31321 381 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 BCAT1P54687 386 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 HUNKP57058 714 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 E2F1Q01094 437 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 FOXF2Q12947 444 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 ARHGEF7Q14155 803 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 TBC1D25Q3MII6 688 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 CCDC152Q4G0S7 254 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 L1TD1Q5T7N2 865 aaKnown RBP8.15□□□□□ -1.1
CSDE1-213ENST00000530784 ZNF782Q6ZMW2 699 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-213ENST00000530784 SEMA6DQ8NFY4 1073 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 DDB2Q92466 427 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 PRR25Q96S07 402 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 MYD88Q99836 296 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 THAP7Q9BT49 309 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-213ENST00000530784 MID2Q9UJV3 735 aa8.15□□□□□ -1.1
CSDE1-213ENST00000530784 LINC01548A6NM66 108 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 SMIM22K7EJ46 135 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 RAB27BO00194 218 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 APAF1O14727 1248 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 DDX58O95786 925 aaKnown RBP8.14□□□□□ -1.11
CSDE1-213ENST00000530784 PCCAP05165 728 aaPredicted RBP8.14□□□□□ -1.11
CSDE1-213ENST00000530784 PRKCBP05771 671 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 TXNP10599 105 aaKnown RBP8.14□□□□□ -1.11
CSDE1-213ENST00000530784 UQCRC1P31930 480 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 SRSF4Q08170 494 aaKnown RBP8.14□□□□□ -1.11
CSDE1-213ENST00000530784 SLC29A2Q14542 456 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 FCRL6Q6DN72 434 aa8.14□□□□□ -1.11
CSDE1-213ENST00000530784 DLK2Q6UY11 383 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms