RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ARHGEF19Q8IW93 802 aa21.76■■□□□ 1.07
SMPD1-204ENST00000530395 AHI1Q8N157 1196 aa21.76■■□□□ 1.07
SMPD1-204ENST00000530395 MINDY1Q8N5J2 469 aa21.76■■□□□ 1.07
SMPD1-204ENST00000530395 ZNF557Q8N988 423 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-204ENST00000530395 ZSWIM1Q9BR11 485 aa21.76■■□□□ 1.07
SMPD1-204ENST00000530395 WSB2Q9NYS7 404 aaPredicted RBP21.76■■□□□ 1.07
SMPD1-204ENST00000530395 PLA2G4CQ9UP65 541 aa21.76■■□□□ 1.07
SMPD1-204ENST00000530395 UPK3BL1B0FP48 263 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 UPK3BL2E5RIL1 263 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 IRAK2O43187 625 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 SART1O43290 800 aaKnown RBP21.75■■□□□ 1.07
SMPD1-204ENST00000530395 IGLV3-27P01718 113 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 KRT5P13647 590 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 TPMTP51580 245 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 TBX4P57082 545 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 RING1Q06587 406 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 SEMA3BQ13214 749 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 CHST9Q7L1S5 443 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.75■■□□□ 1.07
SMPD1-204ENST00000530395 CADM4Q8NFZ8 388 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 CLEC4CQ8WTT0 213 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 DDX50Q9BQ39 737 aaKnown RBP21.75■■□□□ 1.07
SMPD1-204ENST00000530395 GPR174Q9BXC1 333 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 SRRTQ9BXP5 876 aaKnown RBP21.75■■□□□ 1.07
SMPD1-204ENST00000530395 MIS12Q9H081 205 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 INTS2Q9H0H0 1204 aaKnown RBP21.75■■□□□ 1.07
SMPD1-204ENST00000530395 ST7Q9NRC1 585 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 ABCB8Q9NUT2 735 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 GGA2Q9UJY4 613 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 NFE2L3Q9Y4A8 694 aa21.75■■□□□ 1.07
SMPD1-204ENST00000530395 TYW5A2RUC4 315 aaKnown RBP21.74■■□□□ 1.07
SMPD1-204ENST00000530395 GADD45BO75293 160 aaPredicted RBP21.74■■□□□ 1.07
SMPD1-204ENST00000530395 GABBR2O75899 941 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 PABPC1P11940 636 aaKnown RBP21.74■■□□□ 1.07
SMPD1-204ENST00000530395 COPAP53621 1224 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 MPP7Q5T2T1 576 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 CACUL1Q86Y37 369 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 OR2T3Q8NH03 318 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 AZIN2Q96A70 460 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 SERPINB11Q96P15 392 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 TRIM62Q9BVG3 475 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 NUP58Q9BVL2 599 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 PCNX2A6NKB5 2137 aa21.74■■□□□ 1.07
SMPD1-204ENST00000530395 KCNJ18B7U540 433 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 MED7O43513 233 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 ACSL4O60488 711 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 TBL1XO60907 577 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 CALCAP01258 141 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 IGLV3-19P01714 112 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 ATP5BP06576 529 aaKnown RBP21.73■■□□□ 1.07
SMPD1-204ENST00000530395 HLA-EP13747 358 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 ACADSBP45954 432 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 PIK3R6Q5UE93 754 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 PIP4P1Q86T03 277 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 HJURPQ8NCD3 748 aaPredicted RBP21.73■■□□□ 1.07
SMPD1-204ENST00000530395 CYB5D2Q8WUJ1 264 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 FAM149B1Q96BN6 582 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 KREMEN1Q96MU8 473 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 FBRSQ9HAH7 460 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 CNTN6Q9UQ52 1028 aa21.73■■□□□ 1.07
SMPD1-204ENST00000530395 ASPMQ8IZT6 3477 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 A0A1B0GTW7 788 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 KRT37O76014 449 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 POLR2EP19388 210 aaKnown RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 SGSHP51688 502 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 NNTQ13423 1086 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 CAMK2GQ13555 558 aaPredicted RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 MEA1Q16626 185 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 FAM133BQ5BKY9 247 aaKnown RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 MBLAC2Q68D91 279 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 RFWD3Q6PCD5 774 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 ENOSF1Q7L5Y1 443 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 KIAA0907Q7Z7F0 614 aaPredicted RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 ADIPOR2Q86V24 386 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 DQX1Q8TE96 717 aaKnown RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 DNASE2BQ8WZ79 361 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 FAM81BQ96LP2 452 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 ZDHHC5Q9C0B5 715 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 LHX5Q9H2C1 402 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 TMEM245Q9H330 911 aa21.72■■□□□ 1.07
SMPD1-204ENST00000530395 UBE2TQ9NPD8 197 aaPredicted RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 DNAAF2Q9NVR5 837 aaKnown RBP21.72■■□□□ 1.07
SMPD1-204ENST00000530395 DLDP09622 509 aaKnown RBP21.71■■□□□ 1.07
SMPD1-204ENST00000530395 MAOBP27338 520 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 GPD2P43304 727 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 DCAF12L1Q5VU92 463 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 MFN1Q8IWA4 741 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 CCDC117Q8IWD4 279 aaPredicted RBP21.71■■□□□ 1.07
SMPD1-204ENST00000530395 SCUBE3Q8IX30 993 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 ZCCHC9Q8N567 271 aaKnown RBP21.71■■□□□ 1.07
SMPD1-204ENST00000530395 MIR1-1HGQ9H1L0 117 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 PCED1AQ9H1Q7 454 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 TLR6Q9Y2C9 796 aa21.71■■□□□ 1.07
SMPD1-204ENST00000530395 GOLGA6L7A0A1B0GV03 622 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 CAPN9O14815 690 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 LETM1O95202 739 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-204ENST00000530395 SLC6A4P31645 630 aa21.7■■□□□ 1.06
SMPD1-204ENST00000530395 RPL34P49207 117 aaKnown RBP21.7■■□□□ 1.06
SMPD1-204ENST00000530395 SIM1P81133 766 aaPredicted RBP21.7■■□□□ 1.06
SMPD1-204ENST00000530395 GRIK2Q13002 908 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms