RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 SMC1AQ14683 1233 aaKnown RBP7.66□□□□□ -1.18
SVIP-204ENST00000530199 USP10Q14694 798 aaKnown RBP7.66□□□□□ -1.18
SVIP-204ENST00000530199 SSPNQ14714 243 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 LPAL2Q16609 132 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 LETM2Q2VYF4 491 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 FBXO47Q5MNV8 452 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 SPOUT1Q5T280 376 aaKnown RBP7.66□□□□□ -1.18
SVIP-204ENST00000530199 AGBL4Q5VU57 503 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 C19orf48Q6RUI8 117 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 TSSK4Q6SA08 328 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 RNF207Q6ZRF8 634 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 SH2D3CQ8N5H7 860 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 LRRC27Q9C0I9 530 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 RANBP17Q9H2T7 1088 aaKnown RBP7.66□□□□□ -1.18
SVIP-204ENST00000530199 SFXN1Q9H9B4 322 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 BARX1Q9HBU1 254 aaPredicted RBP7.66□□□□□ -1.18
SVIP-204ENST00000530199 MTMR4Q9NYA4 1195 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 AJAP1Q9UKB5 411 aaPredicted RBP7.66□□□□□ -1.18
SVIP-204ENST00000530199 ADAM29Q9UKF5 820 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 RAI2Q9Y5P3 530 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 SQORQ9Y6N5 450 aa7.66□□□□□ -1.18
SVIP-204ENST00000530199 LAMA1P25391 3075 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SH3D21A4FU49 640 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 PHGDHO43175 533 aaKnown RBP7.65□□□□□ -1.18
SVIP-204ENST00000530199 GPR32O75388 356 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 TTLL1O95922 423 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 TOP3BO95985 862 aaKnown RBP7.65□□□□□ -1.18
SVIP-204ENST00000530199 CYP1A1P04798 512 aaPredicted RBP7.65□□□□□ -1.18
SVIP-204ENST00000530199 ZNF806P0C7X5 589 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SCG2P13521 617 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SMARCA1P28370 1054 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 CNR2P34972 360 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 PPM1AP35813 382 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 PRIM2P49643 509 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 GATMP50440 423 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 NOVA1P51513 510 aaKnown RBP7.65□□□□□ -1.18
SVIP-204ENST00000530199 RRADP55042 308 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 DUSP2Q05923 314 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 G3BP1Q13283 466 aaKnown RBP eCLIP7.65□□□□□ -1.18
SVIP-204ENST00000530199 MTM1Q13496 603 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SEPT14Q6ZU15 432 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 ENAHQ8N8S7 591 aaPredicted RBP7.65□□□□□ -1.18
SVIP-204ENST00000530199 IL31RAQ8NI17 732 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SLC22A17Q8WUG5 538 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 GLG1Q92896 1179 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 PHKBQ93100 1093 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 CEP95Q96GE4 821 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SGCZQ96LD1 299 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 MYADMQ96S97 322 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 MAF1Q9H063 256 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 BTBD1Q9H0C5 482 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 CWH43Q9H720 699 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 PTPRHQ9HD43 1115 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 LTB4R2Q9NPC1 389 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 SMC4Q9NTJ3 1288 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 TMEM140Q9NV12 185 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 BAZ2AQ9UIF9 1905 aaKnown RBP7.65□□□□□ -1.18
SVIP-204ENST00000530199 PNMA2Q9UL42 364 aa7.65□□□□□ -1.18
SVIP-204ENST00000530199 GREB1Q4ZG55 1949 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 KIAA1217Q5T5P2 1943 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 FNDC1Q4ZHG4 1894 aaPredicted RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 ZNF532Q9HCE3 1301 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 TEP1Q99973 2627 aaKnown RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 NT5C1B-RDH14C9J2C7 533 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 RASA4BC9J798 803 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 ANHXE9PGG2 379 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 NCAM2O15394 837 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 ARHGAP6O43182 974 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 RASA4O43374 803 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 PRKAB2O43741 272 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 C1QL1O75973 258 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 JUNP05412 331 aaKnown RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 SETSIPP0DME0 302 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 VSIG10L2P0DP72 767 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 MED14OSP0DP75 135 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 EPCAMP16422 314 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 PI3P19957 117 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 PCSK1P29120 753 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 SLC1A4P43007 532 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 ADCY7P51828 1080 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 ATP2C1P98194 919 aaPredicted RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 KRT17Q04695 432 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 TROAPQ12815 778 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 IKQ13123 557 aaPredicted RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 SIM2Q14190 667 aaPredicted RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 GRAMD1BQ3KR37 738 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 HSDL1Q3SXM5 330 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 SLC9C2Q5TAH2 1124 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 TAF2Q6P1X5 1199 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 CTR9Q6PD62 1173 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 CYP26C1Q6V0L0 522 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 USP30Q70CQ3 517 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 GPR155Q7Z3F1 870 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 KLHL36Q8N4N3 616 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 TXNDC5Q8NBS9 432 aaKnown RBP7.64□□□□□ -1.19
SVIP-204ENST00000530199 ACRBPQ8NEB7 543 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 FBXO18Q8NFZ0 1043 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 FEZF2Q8TBJ5 459 aa7.64□□□□□ -1.19
SVIP-204ENST00000530199 CASKIN2Q8WXE0 1202 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms