RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-223ENST00000529986 MRNIPQ6NTE8 343 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 DHDDSQ86SQ9 333 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 ACOT1Q86TX2 421 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 RTL3Q8N8U3 475 aaKnown RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 TINF2Q9BSI4 451 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 UBE2OQ9C0C9 1292 aaKnown RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 WDCPQ9H6R7 721 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 WDR41Q9HAD4 459 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 PCDH9Q9HC56 1237 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 SLCO1B3Q9NPD5 702 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 DYRK4Q9NR20 520 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 NMRK1Q9NWW6 199 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 ATXN10Q9UBB4 475 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 TUBGCP4Q9UGJ1 667 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 TPRKBQ9Y3C4 175 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 SNTNA6NMZ2 147 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 PSMD11O00231 422 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 IL6P05231 212 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 MGAT1P26572 445 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 KRT20P35900 424 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 PRKAA1Q13131 559 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 AUHQ13825 339 aaKnown RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 CCNIQ14094 377 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 ARHGEF7Q14155 803 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 NEK10Q6ZWH5 1172 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 AMIGO2Q86SJ2 522 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 KRT78Q8N1N4 520 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 RAB42Q8N4Z0 105 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 CITED4Q96RK1 184 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 DNAJC18Q9H819 358 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 KCNH7Q9NS40 1196 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 IGSF9BQ9UPX0 1349 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 A0A096LPK6 155 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 PNMA8CA0A1B0GUJ8 204 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 BTN3A3O00478 584 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 DPYSL4O14531 572 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 BANF1O75531 89 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 CNTFP26441 200 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 GPC1P35052 558 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 GRIA3P42263 894 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 GEMP55040 296 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 MTMR2Q13614 643 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 RRP1BQ14684 758 aaKnown RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 PKN1Q16512 942 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 SLC45A4Q5BKX6 768 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 NET1Q7Z628 596 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 ERO1BQ86YB8 467 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 CACTIN-AS1Q8N1I8 211 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 ELMOD1Q8N336 334 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 FNDC5Q8NAU1 212 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 FBXO30Q8TB52 745 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 L3MBTL3Q96JM7 780 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 SEPT5Q99719 369 aaPredicted RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 POLE3Q9NRF9 147 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 VPS45Q9NRW7 570 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 GALNT8Q9NY28 637 aa7.81□□□□□ -1.16
CTNND1-223ENST00000529986 RSL24D1Q9UHA3 163 aaKnown RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 SCAF8Q9UPN6 1271 aaKnown RBP7.81□□□□□ -1.16
CTNND1-223ENST00000529986 AFF2P51816 1311 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 A0A087X0B3 334 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 GNG14A0A1W2PPG7 69 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 PDE9AO76083 593 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 GZMAP12544 262 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ERCC2P18074 760 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 LRPAP1P30533 357 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ACADSBP45954 432 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CASP5P51878 434 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 TROAPQ12815 778 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 KLHL12Q53G59 568 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 LPCAT4Q643R3 524 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 TTC27Q6P3X3 843 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 C3orf67Q6ZVT6 689 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ZDHHC13Q8IUH4 622 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ZNF34Q8IZ26 560 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 FAM45AQ8TCE6 357 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MXRA8Q9BRK3 442 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 SPATA16Q9BXB7 569 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MID1IP1Q9NPA3 183 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MAN1C1Q9NR34 630 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 VANGL2Q9ULK5 521 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DOLKQ9UPQ8 538 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CCDC154A6NI56 674 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DDX3XO00571 662 aaKnown RBP eCLIP7.8□□□□□ -1.162e-13■□□□□ 9.3
CTNND1-223ENST00000529986 MTSS1O43312 755 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 VPS26AO75436 327 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 RPS6KA5O75582 802 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CAMTA2O94983 1202 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 EIF2S1P05198 315 aaKnown RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 NR3C2P08235 984 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 VAV1P15498 845 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ITGB6P18564 788 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ITGAXP20702 1163 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 DSG3P32926 999 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 MSX2P35548 267 aaPredicted RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 GRK3P35626 688 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CNTN1Q12860 1018 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 ALYREFQ86V81 257 aaKnown RBP7.8□□□□□ -1.16
CTNND1-223ENST00000529986 CCNJLQ8IV13 435 aa7.8□□□□□ -1.16
CTNND1-223ENST00000529986 IZUMO1Q8IYV9 350 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms