RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 GOLGA6L7A0A1B0GV03 622 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 TCRBV7S2A1N4TA0A589 114 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 PDE2AO00408 941 aaPredicted RBP25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 GREM1O60565 184 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 GOT1P17174 413 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 DDX6P26196 483 aaKnown RBP eCLIP25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 CORO1AP31146 461 aaKnown RBP25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 AIF1P55008 147 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 ARID3BQ8IVW6 561 aaPredicted RBP25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 USP13Q92995 863 aaPredicted RBP25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 HAPLN3Q96S86 360 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 CDC23Q9UJX2 597 aa25.6■■□□□ 1.69
LDLRAD3-203ENST00000528989 HARS2P49590 506 aaKnown RBP25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 MS4A13Q5J8X5 152 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 ARTNQ5T4W7 220 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 NUGGCQ68CJ6 796 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 NADSYN1Q6IA69 706 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 GPR153Q6NV75 609 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 PSTKQ8IV42 348 aaKnown RBP25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 UNC45BQ8IWX7 931 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 NPAS3Q8IXF0 933 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 RBM41Q96IZ5 413 aaKnown RBP25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 BTN2A3PQ96KV6 586 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 MRFAP1Q9Y605 127 aa25.59■■□□□ 1.69
LDLRAD3-203ENST00000528989 CLUHO75153 1309 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 FGGP02679 453 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 MLLT6P55198 1093 aaPredicted RBP25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 C14orf80Q86SX3 495 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 ZSCAN18Q8TBC5 510 aaPredicted RBP25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 FAM71BQ8TC56 605 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 PLD4Q96BZ4 506 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 TDP1Q9NUW8 608 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 CFAP97Q9P2B7 532 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 AGO1Q9UL18 857 aaKnown RBP25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 COL6A3P12111 3177 aa25.58■■□□□ 1.69
LDLRAD3-203ENST00000528989 LEFTY2O00292 366 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 FOSL2P15408 326 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 SEMA3BQ13214 749 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 PDK2Q15119 407 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 TFDP3Q5H9I0 405 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 SEL1L2Q5TEA6 688 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 ZDHHC14Q8IZN3 488 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 RASGEF1CQ8N431 466 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 ATP6V0D2Q8N8Y2 350 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 SMRP1Q8NCR6 262 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 SH3RF2Q8TEC5 729 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 TSC1Q92574 1164 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 MYEOVQ96EZ4 313 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 OSBPL8Q9BZF1 889 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 OSBPL2Q9H1P3 480 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 SLC12A6Q9UHW9 1150 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 ARHGAP26Q9UNA1 814 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 LRIG2O94898 1065 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 PFKLP17858 780 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 SKIV2LQ15477 1246 aaKnown RBP25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 RAP1GAP2Q684P5 730 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 MAP7D3Q8IWC1 876 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 CSPG4P5Q96PW8 444 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 NR2E1Q9Y466 385 aa25.57■■□□□ 1.68
LDLRAD3-203ENST00000528989 hCG_1818297A0A087WSY0 165 aa25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 AUHQ13825 339 aaKnown RBP25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 TAZQ16635 292 aa25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 ANKRD20A8PQ5CZ79 823 aa25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 RFWD3Q6PCD5 774 aa25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 POMKQ9H5K3 350 aa25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 VANGL2Q9ULK5 521 aa25.56■■□□□ 1.68
LDLRAD3-203ENST00000528989 CES2O00748 559 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 TRDMT1O14717 391 aaKnown RBP25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 SLC6A4P31645 630 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 DYNLT1P63172 113 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 FAM133BQ5BKY9 247 aaKnown RBP25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 PCDH19Q8TAB3 1148 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 LRRC3BQ96PB8 259 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 ACSL4O60488 711 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 KCNA5P22460 613 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 AMPD1P23109 780 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 VIPR2P41587 438 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 LONRF2Q1L5Z9 754 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 FAM78AQ5JUQ0 283 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 SLC13A5Q86YT5 568 aaPredicted RBP25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 ACTRT1Q8TDG2 376 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 C1orf74Q96LT6 269 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 RNF157Q96PX1 679 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 PRMT1Q99873 361 aaKnown RBP25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 SAE1Q9UBE0 346 aaPredicted RBP25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 MFHAS1Q9Y4C4 1052 aa25.55■■□□□ 1.68
LDLRAD3-203ENST00000528989 SOBPA7XYQ1 873 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 EEF2KO00418 725 aaKnown RBP25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 SLC11A2P49281 568 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 IRAK1P51617 712 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 COPS2P61201 443 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 FBXL22Q6P050 247 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 Q6ZNB5 142 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 RFX8Q6ZV50 586 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 PQLC3Q8N755 202 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 ZNF670Q9BS34 389 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 AP1M1Q9BXS5 423 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 ETNK2Q9NVF9 386 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 TMEM51Q9NW97 253 aa25.54■■□□□ 1.68
LDLRAD3-203ENST00000528989 NEU3Q9UQ49 428 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms