RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 F5H5T6 163 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 GOLGA8SH3BPF8 625 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 FOXN3O00409 490 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ARHGAP33O14559 1287 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 FOXD2O60548 495 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 HSF2BPO75031 334 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 LRP3O75074 770 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 GFPT2O94808 682 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 EPN2O95208 641 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 LATS1O95835 1130 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 TRUB2O95900 331 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ATP5BP06576 529 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 PABPC1P11940 636 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 POLR2EP19388 210 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 KIR2DL1P43626 348 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 SULT1E1P49888 294 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ATXN3P54252 364 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 POLR2FP61218 127 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 YWHAZP63104 245 aaKnown RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 UBXN1Q04323 297 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 PUM1Q14671 1186 aaKnown RBP eCLIP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 KRT31Q15323 416 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 GEN1Q17RS7 908 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 FILIP1LQ4L180 1135 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 FAM102AQ5T9C2 384 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 RAP1GAP2Q684P5 730 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 MSANTD2Q6P1R3 559 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 CLEC17AQ6ZS10 378 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 FAM183BPQ6ZVS7 135 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 BHLHA9Q7RTU4 235 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ERICH1Q86X53 443 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 TMEFF1Q8IYR6 380 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 LGI2Q8N0V4 545 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 DEFB106AQ8N104 65 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 AHI1Q8N157 1196 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 SCML4Q8N228 414 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 AOPEPQ8N6M6 819 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF454Q8N9F8 522 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 GANCQ8TET4 914 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 CYB5D2Q8WUJ1 264 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 LOXL4Q96JB6 756 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ACOX2Q99424 681 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 SMOC1Q9H4F8 434 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 ABCB8Q9NUT2 735 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 FANCLQ9NW38 375 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 CALCOCO1Q9P1Z2 691 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 EBF1Q9UH73 591 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 GGA2Q9UJY4 613 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 AJAP1Q9UKB5 411 aaPredicted RBP9.43□□□□□ -0.9
CMTM1-210ENST00000528441 STAP1Q9ULZ2 295 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 STON1Q9Y6Q2 735 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 SDK1Q7Z5N4 2213 aa9.43□□□□□ -0.9
CMTM1-210ENST00000528441 SMTNL1A8MU46 457 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 MEI4A8MW99 385 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 WASH3PC4AMC7 463 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 KHNYNO15037 678 aaKnown RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 IRAK2O43187 625 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PAPSS1O43252 624 aaPredicted RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 AP5Z1O43299 807 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 GREM1O60565 184 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ADAM23O75077 832 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF217O75362 1048 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CAVIN2O95810 425 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PENKP01210 267 aaPredicted RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CFIP05156 583 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SLC2A3P11169 496 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 UCHL3P15374 230 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CYP11B1P15538 503 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 BCKDHBP21953 392 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 STAT1P42224 750 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 NUMBP49757 651 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 COPB1P53618 953 aaKnown RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 TYRO3Q06418 890 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ZNF234Q14588 700 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 EIF4HQ15056 248 aaKnown RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SF3A2Q15428 464 aaKnown RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CSRP2Q16527 193 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 MEA1Q16626 185 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ANO6Q4KMQ2 910 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ZC3H12AQ5D1E8 599 aaKnown RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 MIIPQ5JXC2 388 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 RABGAP1LQ5R372 815 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 KLHDC7AQ5VTJ3 777 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 LYSMD4Q5XG99 296 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 RNF43Q68DV7 783 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SLC36A4Q6YBV0 504 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 RASSF3Q86WH2 238 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CFAP52Q8N1V2 620 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PHTF2Q8N3S3 785 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 NETO1Q8TDF5 533 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 STK32AQ8WU08 396 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SORCS1Q8WY21 1168 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SNX19Q92543 992 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 PRCCQ92733 491 aaPredicted RBP9.42□□□□□ -0.9
CMTM1-210ENST00000528441 RMDN1Q96DB5 314 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 CPXM1Q96SM3 734 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 ANP32EQ9BTT0 268 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SLC4A5Q9BY07 1137 aa9.42□□□□□ -0.9
CMTM1-210ENST00000528441 SLC2A11Q9BYW1 496 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms