RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 EMC10Q5UCC4 262 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 LGI2Q8N0V4 545 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 ZBTB44Q8NCP5 570 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 EDEM3Q9BZQ6 932 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 ZDHHC4Q9NPG8 344 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 TMEM51Q9NW97 253 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 SLC27A6Q9Y2P4 619 aa13.88□□□□□ -0.19
CAPN1-215ENST00000528396 KCNU1A8MYU2 1149 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 AXIN1O15169 862 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 IGLV3-25P01717 112 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 CISD3P0C7P0 127 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 TDGF1P13385 188 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 NTSR1P30989 418 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 CNR2P34972 360 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 KIR2DL1P43626 348 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 PITX1P78337 314 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 DMWDQ09019 674 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 CDH18Q13634 790 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 MPP7Q5T2T1 576 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 ANO7Q6IWH7 933 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 PGBD3Q8N328 593 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 CARNMT1Q8N4J0 409 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 RNF214Q8ND24 703 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 BAP1Q92560 729 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 POLR3BQ9NW08 1133 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-215ENST00000528396 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 KIAA1549LQ6ZVL6 1849 aa13.87□□□□□ -0.19
CAPN1-215ENST00000528396 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-215ENST00000528396 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-215ENST00000528396 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 H0Y626 953 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 SGK1O00141 431 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 TIMM44O43615 452 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 HOXB2P14652 356 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 DESP17661 470 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 TACR2P21452 398 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 SDC4P31431 198 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 SLC6A4P31645 630 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 WASP42768 502 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 CENPCQ03188 943 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 KLHL30Q0D2K2 578 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-215ENST00000528396 STARD3Q14849 445 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 CRY1Q16526 586 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 EGFLAMQ63HQ2 1017 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 IRF2BP2Q7Z5L9 587 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 WDR5BQ86VZ2 330 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 CPLX3Q8WVH0 158 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 NELL1Q92832 810 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 PCDHB18PQ96TA0 734 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 SELENOOQ9BVL4 669 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 WDCPQ9H6R7 721 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 ABCB8Q9NUT2 735 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 GGA2Q9UJY4 613 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 FBXO10Q9UK96 956 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 PLA2G4CQ9UP65 541 aa13.86□□□□□ -0.19
CAPN1-215ENST00000528396 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
CAPN1-215ENST00000528396 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 TCRBV21S2A2A0A5A6 115 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 TMCO5BA8MYB1 307 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 NPC1O15118 1278 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 SYNCRIPO60506 623 aaKnown RBP13.85□□□□□ -0.19
CAPN1-215ENST00000528396 RPP40O75818 363 aaKnown RBP13.85□□□□□ -0.19
CAPN1-215ENST00000528396 TPM1P09493 284 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 KRT3P12035 628 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 UNGP13051 313 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-215ENST00000528396 PDGFRAP16234 1089 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
CAPN1-215ENST00000528396 FLT3P36888 993 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 SGSHP51688 502 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 RPS24P62847 133 aaKnown RBP13.85□□□□□ -0.19
CAPN1-215ENST00000528396 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
CAPN1-215ENST00000528396 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
CAPN1-215ENST00000528396 USP39Q53GS9 565 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms