RNA–Protein interactions for RNA: ENST00000528339.5

SORL1-207, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 3,703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-207ENST00000528339 SLC27A5Q9Y2P5 690 aa8.14□□□□□ -1.11
SORL1-207ENST00000528339 RIOK3O14730 519 aaKnown RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 SUN1O94901 812 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 CXCL14O95715 111 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 NR2C2P49116 596 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 KPNA1P52294 538 aaPredicted RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 GNG11P61952 73 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 ARHGAP29Q52LW3 1261 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 CCDC117Q8IWD4 279 aaPredicted RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 HS6ST3Q8IZP7 471 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 MREGQ8N565 214 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 STKLD1Q8NE28 680 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 IL12RB2Q99665 862 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 NSUN3Q9H649 340 aaKnown RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 ETNK2Q9NVF9 386 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 CTTNBP2NLQ9P2B4 639 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 HCN2Q9UL51 889 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 C19orf67A6NJJ6 358 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 MYO1FO00160 1098 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 CISD3P0C7P0 127 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 RARGP13631 454 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 LCP1P13796 627 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 CD19P15391 556 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 PECAM1P16284 738 aaPredicted RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 CASQ1P31415 396 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 SGSHP51688 502 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 OR52K2Q8NGK3 314 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 AENQ8WTP8 325 aaKnown RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 TIFAQ96CG3 184 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 MYO19Q96H55 970 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 DTLQ9NZJ0 730 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 GCATO75600 419 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 MMP2P08253 660 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 VAV1P15498 845 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 CR2P20023 1033 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 HOXD9P28356 352 aaPredicted RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 PYROXD2Q8N2H3 581 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.13□□□□□ -1.11
SORL1-207ENST00000528339 BTN2A3PQ96KV6 586 aa8.13□□□□□ -1.11
SORL1-207ENST00000528339 ABI2Q9NYB9 513 aaPredicted RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 XPO7Q9UIA9 1087 aaKnown RBP8.13□□□□□ -1.11
SORL1-207ENST00000528339 HACD1B0YJ81 288 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 HOXC11O43248 304 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 MAFKO60675 156 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 ZNF189O75820 626 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 ZRANB2O95218 330 aaKnown RBP eCLIP8.12□□□□□ -1.11
SORL1-207ENST00000528339 PSMA2P25787 234 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 WASHC5Q12768 1159 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 RPS6KA1Q15418 735 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 TTC39BQ5VTQ0 682 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 RFX8Q6ZV50 586 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 PEX26Q7Z412 305 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 C14orf80Q86SX3 495 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 ITIH5Q86UX2 942 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 GDPD5Q8WTR4 605 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 PABPC5Q96DU9 382 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 TRIM44Q96DX7 344 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 MFHAS1Q9Y4C4 1052 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 CEP192Q8TEP8 1941 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 NUP205Q92621 2012 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 E2F8A0AVK6 867 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 C5orf60A6NFR6 353 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 PGRMC1O00264 195 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 FGF10O15520 208 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 LINC01565O15544 149 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 GLUD1P00367 558 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 C8AP07357 584 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 ADRA1AP35348 466 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 USP8P40818 1118 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 DHX34Q14147 1143 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 KCNJ11Q14654 390 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 MESDQ14696 234 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 USP13Q92995 863 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 ART4Q93070 314 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 ZSWIM3Q96MP5 696 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 LBHD1Q9BQE6 289 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 FAM83CQ9BQN1 747 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 AGO1Q9UL18 857 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 AP4E1Q9UPM8 1137 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 PTMAP06454 111 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 SDC4P31431 198 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 NDST2P52849 883 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 SDHAF4Q5VUM1 108 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 OR6B2Q6IFH4 312 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 PLPP6Q8IY26 295 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 RTL3Q8N8U3 475 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 IGSF8Q969P0 613 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 ASB16Q96NS5 453 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 OSBPL8Q9BZF1 889 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 EIF2B3Q9NR50 452 aaKnown RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 NDFIP2Q9NV92 336 aa8.12□□□□□ -1.11
SORL1-207ENST00000528339 ZFP37Q9Y6Q3 630 aaPredicted RBP8.12□□□□□ -1.11
SORL1-207ENST00000528339 COILP38432 576 aaPredicted RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 GRIK1P39086 918 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 NOP2P46087 812 aaKnown RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 MAPKAPK2P49137 400 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 SULT1E1P49888 294 aa8.11□□□□□ -1.11
SORL1-207ENST00000528339 VCPP55072 806 aaKnown RBP8.11□□□□□ -1.11
SORL1-207ENST00000528339 HIBCHQ6NVY1 386 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms