RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 GPR155Q7Z3F1 870 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 TMPRSS6Q8IU80 811 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 SNX19Q92543 992 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 PRCCQ92733 491 aaPredicted RBP11.04□□□□□ -0.64
CPSF1-203ENST00000527916 EEF2KMTQ96G04 330 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 DUSP16Q9BY84 665 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 MKRN2Q9H000 416 aaKnown RBP11.04□□□□□ -0.64
CPSF1-203ENST00000527916 CCSER2Q9H7U1 834 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 MMRN2Q9H8L6 949 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 METTL14Q9HCE5 456 aaKnown RBP11.04□□□□□ -0.64
CPSF1-203ENST00000527916 CYLDQ9NQC7 956 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 FAM49BQ9NUQ9 324 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 MARK1Q9P0L2 795 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 GMIPQ9P107 970 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 FTSJ1Q9UET6 329 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 USP3Q9Y6I4 520 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 AK5Q9Y6K8 562 aa11.04□□□□□ -0.64
CPSF1-203ENST00000527916 KCNJ18B7U540 433 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 WASH3PC4AMC7 463 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 PSMA7O14818 248 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 TLR5O60602 858 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 IGLV3-19P01714 112 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 CD58P19256 250 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 ADORA2BP29275 332 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 ATP5C1P36542 298 aaKnown RBP11.03□□□□□ -0.64
CPSF1-203ENST00000527916 PSEN1P49768 467 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 CCT8P50990 548 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 KIF11P52732 1056 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 CFHR1Q03591 330 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 KIF19Q2TAC6 998 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 PPP1R26Q5T8A7 1209 aaPredicted RBP11.03□□□□□ -0.64
CPSF1-203ENST00000527916 ARHGAP17Q68EM7 881 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 TPGS1Q6ZTW0 290 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 C1orf216Q8TAB5 229 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 UCMAQ8WVF2 138 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 IGSF8Q969P0 613 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 TMEM176AQ96HP8 235 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 CEP63Q96MT8 703 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 KLF16Q9BXK1 252 aaPredicted RBP11.03□□□□□ -0.64
CPSF1-203ENST00000527916 CISHQ9NSE2 258 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 ARMCX3Q9UH62 379 aaPredicted RBP11.03□□□□□ -0.64
CPSF1-203ENST00000527916 ANKRD6Q9Y2G4 727 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 PCDHGA1Q9Y5H4 931 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 SNX11Q9Y5W9 270 aa11.03□□□□□ -0.64
CPSF1-203ENST00000527916 DFNA5O60443 496 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 C1SP09871 688 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 ACO1P21399 889 aaKnown RBP11.02□□□□□ -0.65
CPSF1-203ENST00000527916 PLA2G4AP47712 749 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 GRIA4P48058 902 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 PGFP49763 221 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 RAD23BP54727 409 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 CBWD6Q4V339 395 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 CBWD3Q5JTY5 395 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 CBWD5Q5RIA9 395 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 TCERG1LQ5VWI1 586 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 CCDC186Q7Z3E2 898 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 SLC4A11Q8NBS3 891 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 ERCC4Q92889 916 aaPredicted RBP11.02□□□□□ -0.65
CPSF1-203ENST00000527916 TATDN2Q93075 761 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 SLC35C1Q96A29 364 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 HEXIM2Q96MH2 286 aaKnown RBP11.02□□□□□ -0.65
CPSF1-203ENST00000527916 OSGEPQ9NPF4 335 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 CLIC5Q9NZA1 410 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 MAN1B1Q9UKM7 699 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 NUMA1Q14980 2115 aa11.02□□□□□ -0.65
CPSF1-203ENST00000527916 PIEZO2Q9H5I5 2752 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 TRIM49BA6NDI0 452 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 P4HA2O15460 535 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 TLX3O43711 291 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 GREM1O60565 184 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 CISD3P0C7P0 127 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 TBXAS1P24557 533 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 YWHAEP62258 255 aaKnown RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 ZNF394Q53GI3 561 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 TAF1BQ53T94 588 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 DCAF17Q5H9S7 520 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 RAB41Q5JT25 222 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 TTI2Q6NXR4 508 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 GPRIN1Q7Z2K8 1008 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 ADAT2Q7Z6V5 191 aaKnown RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 TADA2BQ86TJ2 420 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 FAM124AQ86V42 546 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 ANKRD52Q8NB46 1076 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 SNIP1Q8TAD8 396 aaKnown RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 FGF11Q92914 225 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 BHMTQ93088 406 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 WBP2Q969T9 261 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 CDK5RAP1Q96SZ6 601 aaKnown RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 NRSN2Q9GZP1 204 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 CLMPQ9H6B4 373 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 NMUR1Q9HB89 426 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 OSER1Q9NX31 292 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 THAP10Q9P2Z0 257 aaPredicted RBP11.01□□□□□ -0.65
CPSF1-203ENST00000527916 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 KIAA1257Q9ULG3 409 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 SLC27A6Q9Y2P4 619 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 COL12A1Q99715 3063 aa11.01□□□□□ -0.65
CPSF1-203ENST00000527916 BICDL2A1A5D9 508 aa11□□□□□ -0.65
CPSF1-203ENST00000527916 PPP1R3GB7ZBB8 358 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms