RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 TLR6Q9Y2C9 796 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 TPRP12270 2363 aaKnown RBP14.77□□□□□ -0.05
CAPN1-212ENST00000527887 EPG5Q9HCE0 2579 aa14.77□□□□□ -0.05
CAPN1-212ENST00000527887 TYW5A2RUC4 315 aaKnown RBP14.76□□□□□ -0.05
CAPN1-212ENST00000527887 MSI1O43347 362 aaKnown RBP14.76□□□□□ -0.05
CAPN1-212ENST00000527887 TSPAN3O60637 253 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 IGLV3-19P01714 112 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 SYPP08247 313 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 ACADMP11310 421 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 KCNA4P22459 653 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 HLA-FP30511 346 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 NOVA1P51513 510 aaKnown RBP14.76□□□□□ -0.05
CAPN1-212ENST00000527887 TMEM215Q68D42 235 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 PSAPL1Q6NUJ1 521 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 GBP6Q6ZN66 633 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 TMEM110Q86TL2 294 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 SCUBE3Q8IX30 993 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 ZNF606Q8WXB4 792 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 CNTNAP3BQ96NU0 1288 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 NUP58Q9BVL2 599 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 SLC4A5Q9BY07 1137 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 CNTNAP3Q9BZ76 1288 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 MKRN2Q9H000 416 aaKnown RBP14.76□□□□□ -0.05
CAPN1-212ENST00000527887 MIS12Q9H081 205 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 PCED1AQ9H1Q7 454 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 SLC32A1Q9H598 525 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 CAPN10Q9HC96 672 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 ST7Q9NRC1 585 aa14.76□□□□□ -0.05
CAPN1-212ENST00000527887 MYO18AQ92614 2054 aaKnown RBP14.76□□□□□ -0.05
CAPN1-212ENST00000527887 CAPN9O14815 690 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 CFIP05156 583 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 FYNP06241 537 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 EPHX1P07099 455 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 DLDP09622 509 aaKnown RBP14.75□□□□□ -0.05
CAPN1-212ENST00000527887 PABPC1P11940 636 aaKnown RBP14.75□□□□□ -0.05
CAPN1-212ENST00000527887 GNA15P30679 374 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 ZBTB16Q05516 673 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 MTA1Q13330 715 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 CAMK2GQ13555 558 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-212ENST00000527887 EXOC3L4Q17RC7 722 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 CCDC183Q5T5S1 534 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 TRIM65Q6PJ69 517 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 CHST9Q7L1S5 443 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 SLC41A1Q8IVJ1 513 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 CCDC117Q8IWD4 279 aaPredicted RBP14.75□□□□□ -0.05
CAPN1-212ENST00000527887 HDDC3Q8N4P3 179 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 OR2T3Q8NH03 318 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 FIBINQ8TAL6 211 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 DNASE2BQ8WZ79 361 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 FAM149B1Q96BN6 582 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 TOE1Q96GM8 510 aaKnown RBP14.75□□□□□ -0.05
CAPN1-212ENST00000527887 SLC39A13Q96H72 371 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 HSPA12BQ96MM6 686 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 ZDHHC5Q9C0B5 715 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 TMEM245Q9H330 911 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 THAP9Q9H5L6 903 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 POPDC2Q9HBU9 364 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 ABCB8Q9NUT2 735 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 APEX2Q9UBZ4 518 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 SUN2Q9UH99 717 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 GGA2Q9UJY4 613 aa14.75□□□□□ -0.05
CAPN1-212ENST00000527887 THADAQ6YHU6 1953 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 CHD8Q9HCK8 2581 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 PIK3R2O00459 728 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 ARHGAP33O14559 1287 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 TBL1XO60907 577 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 GLI1P08151 1106 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 POLR2EP19388 210 aaKnown RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 TPMTP51580 245 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 COPAP53621 1224 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 SNX16P57768 344 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 YWHAZP63104 245 aaKnown RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 SLC14A1Q13336 389 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 HNRNPDQ14103 355 aaKnown RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 GSE1Q14687 1217 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 CAMK4Q16566 473 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 UAP1L1Q3KQV9 507 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 FAM133BQ5BKY9 247 aaKnown RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 SH3PXD2AQ5TCZ1 1133 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 CAVIN1Q6NZI2 390 aaKnown RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 ADIPOR2Q86V24 386 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 FAM114A1Q8IWE2 563 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 RGL4Q8IZJ4 473 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 KDM1BQ8NB78 822 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 HJURPQ8NCD3 748 aaPredicted RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 DQX1Q8TE96 717 aaKnown RBP14.74□□□□□ -0.05
CAPN1-212ENST00000527887 CLEC4CQ8WTT0 213 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 SLC12A6Q9UHW9 1150 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 PLXND1Q9Y4D7 1925 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 CEP295Q9C0D2 2601 aa14.74□□□□□ -0.05
CAPN1-212ENST00000527887 THAP12O43422 761 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 OPHN1O60890 802 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 APOEP02649 317 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 ASLP04424 464 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 PRKCHP24723 683 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 MAPK8P45983 427 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 SEMA3BQ13214 749 aa14.73□□□□□ -0.05
CAPN1-212ENST00000527887 TPD52L1Q16890 204 aaPredicted RBP14.73□□□□□ -0.05
CAPN1-212ENST00000527887 FNDC3BQ53EP0 1204 aaKnown RBP14.73□□□□□ -0.05
CAPN1-212ENST00000527887 CT47A1Q5JQC4 288 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms