RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 CAMK2BQ13554 666 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 FNDC3BQ53EP0 1204 aaKnown RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 TMEM215Q68D42 235 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 SLC9A9Q8IVB4 645 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 FAM186BQ8IYM0 893 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 SMYD4Q8IYR2 804 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 UBA3Q8TBC4 463 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 EDEM1Q92611 657 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 PRCCQ92733 491 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 TAF4BQ92750 862 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 TATDN2Q93075 761 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 NXPE2Q96DL1 559 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 IMPG2Q9BZV3 1241 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 NIF3L1Q9GZT8 377 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 MTG2Q9H4K7 406 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 FAM124BQ9H5Z6 455 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 ITM2CQ9NQX7 267 aa10.37□□□□□ -0.75
CAPN1-210ENST00000527699 KIAA1522Q9P206 1035 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 THAP10Q9P2Z0 257 aaPredicted RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 MYO18AQ92614 2054 aaKnown RBP10.37□□□□□ -0.75
CAPN1-210ENST00000527699 A0A1B0GTW7 788 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 GOLGA6L7A0A1B0GV03 622 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 GJB3O75712 270 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 PENKP01210 267 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 CYBBP04839 570 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 TRIM21P19474 475 aaKnown RBP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 HOXD12P35452 270 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 SGSHP51688 502 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 TKTL1P51854 596 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 COPAP53621 1224 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 CLDN6P56747 220 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 INCA1Q0VD86 236 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 LRMPQ12912 555 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 SLC14A1Q13336 389 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 GOLGA7BQ2TAP0 167 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 HLA-BQ31612 363 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 ARHGAP40Q5TG30 622 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 SERPINA13PQ6UXR4 307 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 CCDC186Q7Z3E2 898 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 ANKS1BQ7Z6G8 1248 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 RABEPKQ7Z6M1 372 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 PIGZQ86VD9 579 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 HSCBQ8IWL3 235 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 SLC4A11Q8NBS3 891 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 UCMAQ8WVF2 138 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 FOXJ1Q92949 421 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 WBP1Q96G27 269 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 PIWIL1Q96J94 861 aaKnown RBP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 ULBP1Q9BZM6 244 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 C6orf106Q9H6K1 298 aaPredicted RBP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 ELOVL2Q9NXB9 296 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 MARCH2Q9P0N8 246 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 USP36Q9P275 1121 aaKnown RBP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 SUSD2Q9UGT4 822 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 FBXO10Q9UK96 956 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 BTBD3Q9Y2F9 522 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 FNDC3AQ9Y2H6 1198 aaKnown RBP10.36□□□□□ -0.75
CAPN1-210ENST00000527699 PLXND1Q9Y4D7 1925 aa10.36□□□□□ -0.75
CAPN1-210ENST00000527699 LRRK2Q5S007 2527 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 FAM47DPA6NHR8 397 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 METTL12A8MUP2 240 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 GFRA2O00451 464 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 BCAT2O15382 392 aaPredicted RBP10.35□□□□□ -0.75
CAPN1-210ENST00000527699 MSI1O43347 362 aaKnown RBP10.35□□□□□ -0.75
CAPN1-210ENST00000527699 FSBPO95073 299 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
CAPN1-210ENST00000527699 LCP1P13796 627 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 ACSL1P33121 698 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 MATKP42679 507 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 NDUFA8P51970 172 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 RAD23BP54727 409 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 COG7P83436 770 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 NFATC3Q12968 1075 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 ADAM9Q13443 819 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 PRAMEF14Q5SWL7 426 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 CHST9Q7L1S5 443 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 TADA2BQ86TJ2 420 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 CCDC150Q8NCX0 1101 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 RHBDD1Q8TEB9 315 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 TMEM176AQ96HP8 235 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 CYP3A43Q9HB55 503 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 TM7SF3Q9NS93 570 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 CISHQ9NSE2 258 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 ABCB8Q9NUT2 735 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 STIM2Q9P246 746 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 RCOR1Q9UKL0 485 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 PCOLCE2Q9UKZ9 415 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 STRIP2Q9ULQ0 834 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 SNX11Q9Y5W9 270 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 USP3Q9Y6I4 520 aa10.35□□□□□ -0.75
CAPN1-210ENST00000527699 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 IKBKBO14920 756 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 CD19P15391 556 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 CHKAP35790 457 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 PSMC2P35998 433 aaKnown RBP10.34□□□□□ -0.75
CAPN1-210ENST00000527699 SYKP43405 635 aa10.34□□□□□ -0.75
CAPN1-210ENST00000527699 RGS7P49802 495 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms