RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-205ENST00000527497 TRIM13O60858 407 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 OR2C1O95371 312 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 URODP06132 367 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 CCDC175P0C221 793 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 MYBL1P10243 752 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 P4HA1P13674 534 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 CHRM3P20309 590 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 MCM3P25205 808 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 EPHA3P29320 983 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 UQCRC1P31930 480 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 HPDP32754 393 aaPredicted RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 TCF7P36402 384 aaPredicted RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 PBX3P40426 434 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 MRPL12P52815 198 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 RCAN1P53805 252 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 NPEPPSP55786 919 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 RRP1P56182 461 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 FAM3BP58499 235 aaPredicted RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 ADAM8P78325 824 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 ATP2C1P98194 919 aaPredicted RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 TIAL1Q01085 375 aaKnown RBP eCLIP6.39□□□□□ -1.39
NXF1-205ENST00000527497 DDR1Q08345 913 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 PTPN14Q15678 1187 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 BMT2Q1RMZ1 405 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 AAK1Q2M2I8 961 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 SLC9B1Q4ZJI4 515 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 MTFR2Q6P444 385 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 CLEC9AQ6UXN8 241 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 RRM2BQ7LG56 351 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 KRT27Q7Z3Y8 459 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 B3GNT8Q7Z7M8 397 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 MON1AQ86VX9 555 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 REXO1L1PQ8IX06 675 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 KYQ8NBH2 561 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 ZFP28Q8NHY6 868 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 OVCA2Q8WZ82 227 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 SMARCE1Q969G3 411 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 INTS12Q96CB8 462 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 KLHL29Q96CT2 875 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 LIN37Q96GY3 246 aaPredicted RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 FAR2Q96K12 515 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 GCNAQ96QF7 691 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 TRIB1Q96RU8 372 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 ABHD1Q96SE0 405 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 C11orf84Q9BUA3 381 aaPredicted RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 THUMPD3Q9BV44 507 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 PTDSS2Q9BVG9 487 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 TSPY26PQ9H489 355 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 CYP4F11Q9HBI6 524 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.39□□□□□ -1.39
NXF1-205ENST00000527497 SLC27A6Q9Y2P4 619 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 MRPS17Q9Y2R5 130 aaKnown RBP6.39□□□□□ -1.39
NXF1-205ENST00000527497 ABCC9O60706 1549 aa6.39□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3DA0A087WVF3 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3IA0A087WXS9 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3EA0A087X179 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3KA0A087X1G2 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3BA6NDS4 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3FA6NER0 549 aaPredicted RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBKBP1A7MCY6 615 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3LB9A6J9 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 ADM5C9JUS6 153 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 AGPSO00116 658 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 WDR46O15213 610 aaKnown RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 SLC22A3O75751 556 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 WDR47O94967 919 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 C1SP09871 688 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3HP0C7X1 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 HLA-DPA1P20036 260 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 SLC6A2P23975 617 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 PPIFP30405 207 aaKnown RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 HOXA10P31260 410 aaPredicted RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 TLX1P31314 330 aaPredicted RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 CIITAP33076 1130 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 NRIP1P48552 1158 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 PCLAFQ15004 111 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 AGBL4Q5VU57 503 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 ANKRD40Q6AI12 368 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3GQ6DHY5 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3CQ6IPX1 549 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 CCDC144NLQ6NUI1 221 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TAPT1Q6NXT6 567 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TAF2Q6P1X5 1199 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 SHQ1Q6PI26 577 aaKnown RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 SLC30A9Q6PML9 568 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 BTN2A1Q7KYR7 527 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 PIWIL3Q7Z3Z3 882 aaKnown RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 SPRED2Q7Z698 418 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 GLRX5Q86SX6 157 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 LINC00346Q8IVM7 164 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 SLC15A3Q8IY34 581 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TBC1D3Q8IZP1 549 aaPredicted RBP6.38□□□□□ -1.39
NXF1-205ENST00000527497 ZNF619Q8N2I2 560 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 TMEM116Q8NCL8 245 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 FAM149B1Q96BN6 582 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 RNFT2Q96EX2 444 aa6.38□□□□□ -1.39
NXF1-205ENST00000527497 SIPA1Q96FS4 1042 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms