RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 PPP1R2P3Q6NXS1 205 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 MFN1Q8IWA4 741 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 LGI2Q8N0V4 545 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 IL17RCQ8NAC3 791 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 ZBTB44Q8NCP5 570 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 IQCDQ96DY2 449 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 EDEM3Q9BZQ6 932 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 CIPCQ9C0C6 399 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 ZDHHC4Q9NPG8 344 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 TMEM51Q9NW97 253 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 SLC27A6Q9Y2P4 619 aa13.88□□□□□ -0.19
CAPN1-209ENST00000527469 KCNU1A8MYU2 1149 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 AXIN1O15169 862 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 IGLV3-25P01717 112 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 CISD3P0C7P0 127 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 TDGF1P13385 188 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 HOXD9P28356 352 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 NTSR1P30989 418 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 CNR2P34972 360 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 KIR2DL1P43626 348 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 PITX1P78337 314 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 DMWDQ09019 674 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 CDH18Q13634 790 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 EIF4HQ15056 248 aaKnown RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 SLC25A52Q3SY17 297 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 FAM133BQ5BKY9 247 aaKnown RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 RABGAP1LQ5R372 815 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 MPP7Q5T2T1 576 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 RAP1GAP2Q684P5 730 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 ANO7Q6IWH7 933 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 PGBD3Q8N328 593 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 CARNMT1Q8N4J0 409 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 RNF214Q8ND24 703 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 BAP1Q92560 729 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 NUCKS1Q9H1E3 243 aaKnown RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 METTL5Q9NRN9 209 aaKnown RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 POLR3BQ9NW08 1133 aaPredicted RBP13.87□□□□□ -0.19
CAPN1-209ENST00000527469 STARD13Q9Y3M8 1113 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 KIAA1549LQ6ZVL6 1849 aa13.87□□□□□ -0.19
CAPN1-209ENST00000527469 EP300Q09472 2414 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-209ENST00000527469 PTPRZ1P23471 2315 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-209ENST00000527469 PRR23AA6NEV1 266 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 H0Y626 953 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 SGK1O00141 431 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 TIMM44O43615 452 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 HOXB2P14652 356 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 DESP17661 470 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 TACR2P21452 398 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 SDC4P31431 198 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 SLC6A4P31645 630 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 WASP42768 502 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 CENPCQ03188 943 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 KLHL30Q0D2K2 578 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 SIM2Q14190 667 aaPredicted RBP13.86□□□□□ -0.19
CAPN1-209ENST00000527469 STARD3Q14849 445 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 CRY1Q16526 586 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 FIGNQ5HY92 759 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 MS4A13Q5J8X5 152 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 EGFLAMQ63HQ2 1017 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 NADSYN1Q6IA69 706 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 IRF2BP2Q7Z5L9 587 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 VPS36Q86VN1 386 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 WDR5BQ86VZ2 330 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 WFIKKN2Q8TEU8 576 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 CPLX3Q8WVH0 158 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 NELL1Q92832 810 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 PCDHB18PQ96TA0 734 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 SELENOOQ9BVL4 669 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 WDCPQ9H6R7 721 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 ABCB8Q9NUT2 735 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 GGA2Q9UJY4 613 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 FBXO10Q9UK96 956 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 PLA2G4CQ9UP65 541 aa13.86□□□□□ -0.19
CAPN1-209ENST00000527469 SMG5Q9UPR3 1016 aaKnown RBP13.86□□□□□ -0.19
CAPN1-209ENST00000527469 CCDC163A0A0D9SF12 145 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 TCRBV21S2A2A0A5A6 115 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 TMCO5BA8MYB1 307 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 NPC1O15118 1278 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 SYNCRIPO60506 623 aaKnown RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 RPP40O75818 363 aaKnown RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 TPM1P09493 284 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 KRT3P12035 628 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 UNGP13051 313 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 PDGFRAP16234 1089 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 POLR2EP19388 210 aaKnown RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 FLT3P36888 993 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 SGSHP51688 502 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 RPS24P62847 133 aaKnown RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 GEN1Q17RS7 908 aa13.85□□□□□ -0.19
CAPN1-209ENST00000527469 USP39Q53GS9 565 aaKnown RBP13.85□□□□□ -0.19
CAPN1-209ENST00000527469 TDRD12Q587J7 1177 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms