RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 SLC12A4Q9UP95 1085 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 AGAP1Q9UPQ3 857 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 EXOC7Q9UPT5 735 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 CLCA2Q9UQC9 943 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 CFL2Q9Y281 166 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 TBC1D30Q9Y2I9 924 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 ZBTB1Q9Y2K1 713 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 LRCH1Q9Y2L9 728 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 PPP2R2CQ9Y2T4 447 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 TNPO3Q9Y5L0 923 aaKnown RBP3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 CHD2O14647 1828 aaKnown RBP3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 PDS5AQ29RF7 1337 aaKnown RBP3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 MROH7Q68CQ1 1323 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 SALL3Q9BXA9 1300 aa3.9□□□□□ -1.79
CLNS1A-209ENST00000527299 MYH15Q9Y2K3 1946 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 EIF4G3O43432 1585 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SMARCA4P51532 1647 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 TUBGCP6Q96RT7 1819 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 hCG_2014768A0A024R1R8 64 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SMIM31A0A1B0GVY4 71 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 VPS37CA5D8V6 355 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CCT8L1PA6NM43 557 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 MARCH11A6NNE9 402 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 E9PBE3 544 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GOLGA8MH3BSY2 632 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CPLX1O14810 134 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 C1QL1O75973 258 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 PDE5AO76074 875 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SPDEFO95238 335 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 YEATS4O95619 227 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ZBED1O96006 694 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ZFYP08048 801 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 PAEPP09466 180 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SFTPCP11686 197 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GZMAP12544 262 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GLULP15104 373 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 NQO1P15559 274 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CHKAP35790 457 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 HSD17B2P37059 387 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 HSPA9P38646 679 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 MDH1P40925 334 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GZMKP49863 264 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 HSD17B4P51659 736 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 AP3M2P53677 418 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 KRTAP10-6P60371 365 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 RUNX1T1Q06455 604 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GALNT1Q10472 559 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 DCTN2Q13561 401 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GPR162Q16538 588 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 PTPROQ16827 1216 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ANO4Q32M45 955 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ZCWPW2Q504Y3 356 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 METTL21CQ5VZV1 264 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 DENND2CQ68D51 928 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 FAM173BQ6P4H8 233 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 DRICH1Q6PGQ1 229 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CORO6Q6QEF8 472 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 UNC5DQ6UXZ4 953 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 KRT28Q7Z3Y7 464 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 PPP1R42Q7Z4L9 355 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 DDX42Q86XP3 938 aaKnown RBP eCLIP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 XYLT1Q86Y38 959 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CD302Q8IX05 232 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 BBS5Q8N3I7 341 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CCDC89Q8N998 374 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 DDHD1Q8NEL9 900 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ANGPTL6Q8NI99 470 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CCDC12Q8WUD4 166 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ARHGEF2Q92974 986 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ABTB1Q969K4 478 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 RRP36Q96EU6 259 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 NRBF2Q96F24 287 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 MOGAT1Q96PD6 335 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 RBM14Q96PK6 669 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 MTMR9Q96QG7 549 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 WDR24Q96S15 920 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 TTC1Q99614 292 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SLF1Q9BQI6 1058 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ERP44Q9BS26 406 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 DUSP26Q9BV47 211 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SLC29A3Q9BZD2 475 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 GLT8D2Q9H1C3 349 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 TRPV6Q9H1D0 765 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SMARCAD1Q9H4L7 1026 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 SPC25Q9HBM1 224 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 VTA1Q9NP79 307 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CCDC177Q9NQR7 707 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 MRGBPQ9NV56 204 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 PANK4Q9NVE7 773 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ARMC1Q9NVT9 282 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 THAP1Q9NVV9 213 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 AIPL1Q9NZN9 384 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 PPP1R1BQ9UD71 204 aaPredicted RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 HMGXB4Q9UGU5 601 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 INTUQ9ULD6 942 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 RIMKLBQ9ULI2 386 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 HBS1LQ9Y450 684 aaKnown RBP3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 CD2APQ9Y5K6 639 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 ABCC3O15438 1527 aa3.89□□□□□ -1.79
CLNS1A-209ENST00000527299 EFCAB6Q5THR3 1501 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 304.8 ms