RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PLEKHS1Q5SXH7 462 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 CC2D1BQ5T0F9 858 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 ABLIM2Q6H8Q1 611 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 RAB12Q6IQ22 244 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 TAF2Q6P1X5 1199 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 FAM83HQ6ZRV2 1179 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 MED25Q71SY5 747 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 PIWIL3Q7Z3Z3 882 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 KCTD20Q7Z5Y7 419 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 RALYLQ86SE5 291 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 NLRP14Q86W24 1093 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 LDLRAD3Q86YD5 345 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 C1orf210Q8IVY1 113 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 SCN4BQ8IWT1 228 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 LRRC71Q8N4P6 559 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 GABPB2Q8TAK5 448 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 SMCR8Q8TEV9 937 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 WDR60Q8WVS4 1066 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 HMGB4Q8WW32 186 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 EXTL1Q92935 676 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 ZNF653Q96CK0 615 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 ELP4Q96EB1 424 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 TSGA13Q96PP4 275 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 PLEKHG4BQ96PX9 1271 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 NR1H4Q96RI1 486 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 LMF1Q96S06 567 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 ABHD1Q96SE0 405 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 IWS1Q96ST2 819 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 ACAT2Q9BWD1 397 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 APOL6Q9BWW8 343 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 TINAGL1Q9GZM7 467 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 DNAI2Q9GZS0 605 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 INTS2Q9H0H0 1204 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 STN1Q9H668 368 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 PLEKHA2Q9HB19 425 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 GPR35Q9HC97 309 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 SEMA4BQ9NPR2 832 aaPredicted RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 PCDHB16Q9NRJ7 776 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 RXFP3Q9NSD7 469 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 MRPL15Q9P015 296 aaKnown RBP4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 ANAPC5Q9UJX4 755 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 SARDHQ9UL12 918 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 SLC45A2Q9UMX9 530 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 AGAP1Q9UPQ3 857 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 AGTPBP1Q9UPW5 1226 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 GDAQ9Y2T3 454 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 CCL27Q9Y4X3 112 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 DMRT1Q9Y5R6 373 aa4.11□□□□□ -1.75
CLNS1A-208ENST00000527265 CCDC69A6NI79 296 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 AQP7P3A6NL99 342 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 KRTAP29-1A8MX34 341 aaPredicted RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 DDX39AO00148 427 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 TEX33O43247 280 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 FOXS1O43638 330 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 CCNT2O60583 730 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SLC43A1O75387 559 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 PIAS2O75928 621 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 GGPS1O95749 300 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SPARCP09486 303 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 IL2RBP14784 551 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SLC6A4P31645 630 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 PPARGP37231 505 aaPredicted RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 CDK7P50613 346 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 WNT3P56703 355 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 MRPS21P82921 87 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 IL1RL1Q01638 556 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 C17orf67Q0P5P2 114 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SF3A3Q12874 501 aaKnown RBP eCLIP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SP140Q13342 867 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 IRF3Q14653 427 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 KCNB1Q14721 858 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 INSCQ1MX18 579 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 PLA1AQ53H76 456 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 METTL24Q5JXM2 366 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 MANEALQ5VSG8 457 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 CACHD1Q5VU97 1274 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 TCTN3Q6NUS6 607 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 IYDQ6PHW0 289 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 C11orf88Q6PI97 169 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 ABRAXAS1Q6UWZ7 409 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 Q6ZUG5 572 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SEM1Q6ZVN7 128 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 ZNF365Q70YC5 407 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 BHLHA9Q7RTU4 235 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 ZNF572Q7Z3I7 529 aaPredicted RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 SLC9B2Q86UD5 537 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 LINC00346Q8IVM7 164 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 AOPEPQ8N6M6 819 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 TMCO5AQ8N6Q1 288 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 ANKRD44Q8N8A2 993 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 TRIML1Q8N9V2 468 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 FAM71DQ8N9W8 422 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 TDRD5Q8NAT2 981 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 UTP15Q8TED0 518 aaKnown RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 PTP4A1Q93096 173 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 NKD2Q969F2 451 aaPredicted RBP4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 KIF1BPQ96EK5 621 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 CABS1Q96KC9 395 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 GNRHR2Q96P88 292 aa4.1□□□□□ -1.75
CLNS1A-208ENST00000527265 LENG8Q96PV6 779 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms