RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CDO1Q16878 200 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 RAB6CQ53S08 254 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 TMEM196Q5HYL7 178 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 NAIF1Q69YI7 327 aaPredicted RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 CWF19L1Q69YN2 538 aaKnown RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 RFWD3Q6PCD5 774 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 ETFBKMTQ8IXQ9 262 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 FLCNQ8NFG4 579 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 FAM172AQ8WUF8 416 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 ARHGEF26Q96DR7 871 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 TMA16Q96EY4 203 aaKnown RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 P2RY13Q9BPV8 354 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 PACSIN1Q9BY11 444 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 OSBPL6Q9BZF3 934 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 FOXQ1Q9C009 403 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 TRIM7Q9C029 511 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 TKTL2Q9H0I9 626 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 RAB6CQ9H0N0 254 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 FBRSL1Q9HCM7 1045 aaKnown RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 ANLNQ9NQW6 1124 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 RAPGEFL1Q9UHV5 662 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 MTF2Q9Y483 593 aaPredicted RBP13.4□□□□□ -0.26
SMPD1-202ENST00000526280 ZDBF2Q9HCK1 2354 aa13.4□□□□□ -0.26
SMPD1-202ENST00000526280 FAM170BA6NMN3 283 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PRR33A8MZF0 331 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 I6L893 689 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CCP110O43303 1012 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CACNG3O60359 315 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PAGE1O75459 146 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CYBBP04839 570 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 COL9A1P20849 921 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 TARSP26639 723 aaKnown RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CLCN5P51795 746 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 FZD5Q13467 585 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 UBXN2BQ14CS0 331 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PON2Q15165 354 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 MPPE1Q53F39 396 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 MS4A13Q5J8X5 152 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PIK3R6Q5UE93 754 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 C12orf40Q86WS4 652 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 FAM131BQ86XD5 332 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 FBXL6Q8N531 539 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 NAT16Q8N8M0 369 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 DDI1Q8WTU0 396 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CTNNBL1Q8WYA6 563 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CD101Q93033 1021 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 BHMTQ93088 406 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 EXOC4Q96A65 974 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PRMT1Q99873 361 aaKnown RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 BAG1Q99933 345 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 NUP85Q9BW27 656 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PLK2Q9NYY3 685 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 FBXO10Q9UK96 956 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 NDRG2Q9UN36 371 aaKnown RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 SIT1Q9Y3P8 196 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 SOWAHDA6NJG2 315 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 TSPAN3O60637 253 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 TULP3O75386 442 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 TMEM253P0C7T8 217 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CHRNB1P11230 501 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 AOC1P19801 751 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 TACR2P21452 398 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PSMA2P25787 234 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 ADRA1BP35368 520 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CYLC1P35663 651 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 SGSHP51688 502 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 GSDMDP57764 484 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 ZNF252P-AS1Q0IIN9 211 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 GRSF1Q12849 480 aaKnown RBP eCLIP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 MPP7Q5T2T1 576 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 ACBD5Q5T8D3 534 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 RAP1GAP2Q684P5 730 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 ASTLQ6HA08 431 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CHSY1Q86X52 802 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 TMEM139Q8IV31 216 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 CCDC105Q8IYK2 499 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PHTF2Q8N3S3 785 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 MYEOVQ96EZ4 313 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 C1orf74Q96LT6 269 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PRICKLE1Q96MT3 831 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 XPO6Q96QU8 1125 aaKnown RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 HAPLN3Q96S86 360 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 PNKPQ96T60 521 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 UVRAGQ9P2Y5 699 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 INTUQ9ULD6 942 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 ZKSCAN5Q9Y2L8 839 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 HS3ST4Q9Y661 456 aa13.39□□□□□ -0.27
SMPD1-202ENST00000526280 EPN1Q9Y6I3 576 aaPredicted RBP13.39□□□□□ -0.27
SMPD1-202ENST00000526280 A0A0A0MRY4 1105 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 EIF3CLB5ME19 914 aaKnown RBP13.38□□□□□ -0.27
SMPD1-202ENST00000526280 F5H5T6 163 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 NCAM2O15394 837 aa13.38□□□□□ -0.27
SMPD1-202ENST00000526280 PI15O43692 258 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms