RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 SLC8A1P32418 973 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 CDK7P50613 346 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 DMWDQ09019 674 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 SF3A3Q12874 501 aaKnown RBP eCLIP4.95□□□□□ -1.62
CD44-215ENST00000525241 KIAA1614Q5VZ46 1190 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 WDR93Q6P2C0 686 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 RFX6Q8HWS3 928 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 CCDC117Q8IWD4 279 aaPredicted RBP4.95□□□□□ -1.62
CD44-215ENST00000525241 NKAPQ8N5F7 415 aaKnown RBP4.95□□□□□ -1.62
CD44-215ENST00000525241 OSR1Q8TAX0 266 aaPredicted RBP4.95□□□□□ -1.62
CD44-215ENST00000525241 HMGB4Q8WW32 186 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 SENP7Q9BQF6 1050 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 TM2D2Q9BX73 214 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 TMEM120AQ9BXJ8 343 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 MLXIPLQ9NP71 852 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 RAB21Q9UL25 225 aa4.95□□□□□ -1.62
CD44-215ENST00000525241 SMIM35A0A1B0GVV1 85 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 EFCAB8A8MWE9 144 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 RNF8O76064 485 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 IGFBP2P18065 325 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 GRK6P43250 576 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 TAS2R50P59544 299 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 YPEL5P62699 121 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 RBM6P78332 1123 aaKnown RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 TLE3Q04726 772 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 ZNF268Q14587 947 aaPredicted RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 DAZAP2Q15038 168 aaPredicted RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 SUPT20HL1Q3ZLR7 823 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 ZNF569Q5MCW4 686 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 TTC22Q5TAA0 569 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 SLC18B1Q6NT16 456 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 MIS18BP1Q6P0N0 1132 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 RAB11FIP2Q7L804 512 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 YTHDF3Q7Z739 585 aaKnown RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 NEK8Q86SG6 692 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 C16orf71Q8IYS4 520 aaPredicted RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 TRAPPC12Q8WVT3 735 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 CELF1Q92879 486 aaKnown RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 LTV1Q96GA3 475 aaPredicted RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 FCRL5Q96RD9 977 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 ARL8BQ9NVJ2 186 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 KLHL13Q9P2N7 655 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 SRP68Q9UHB9 627 aaKnown RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 TRPC5Q9UL62 973 aaPredicted RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 C19orf53Q9UNZ5 99 aaPredicted RBP4.94□□□□□ -1.62
CD44-215ENST00000525241 SLC12A4Q9UP95 1085 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 LZTS1Q9Y250 596 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 SPATA31A5Q5VU36 1347 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 SPATA31A7Q8IWB4 1347 aa4.94□□□□□ -1.62
CD44-215ENST00000525241 CYP2D7A0A087X1C5 515 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 PIP5K1CO60331 668 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 BCAR3O75815 825 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 RFPL3SP0C7P2 107 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 TACR3P29371 465 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 SLC37A1P57057 533 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 MRPS21P82921 87 aaKnown RBP4.93□□□□□ -1.62
CD44-215ENST00000525241 POSTNQ15063 836 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 TIGD6Q17RP2 521 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 FAM110CQ1W6H9 321 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 GALNTL6Q49A17 601 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 SLC39A5Q6ZMH5 540 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 IGFBPL1Q8WX77 278 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 GPR78Q96P69 363 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 BRD8Q9H0E9 1235 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 ELAC1Q9H777 363 aaKnown RBP4.93□□□□□ -1.62
CD44-215ENST00000525241 PPCSQ9HAB8 311 aa4.93□□□□□ -1.62
CD44-215ENST00000525241 LIN7CQ9NUP9 197 aaKnown RBP4.93□□□□□ -1.62
CD44-215ENST00000525241 CYP3A7-CYP3A51PA0A087WV96 503 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 DSCR3O14972 297 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 TP73O15350 636 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 TPD52L2O43399 206 aaKnown RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 PLAUP00749 431 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 ENO1P06733 434 aaKnown RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 CYP21A2P08686 494 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 PRR35P0CG20 571 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 CYP3A7P24462 503 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 ATP5F1P24539 256 aaPredicted RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 CST5P28325 142 aaPredicted RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 HOXA7P31268 230 aaPredicted RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 GRK5P34947 590 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 ARHGAP25P42331 645 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 HALP42357 657 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 SOX2P48431 317 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 SSBP2P81877 361 aaPredicted RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 CFHR1Q03591 330 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 PRKG1Q13976 671 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 ANO1Q5XXA6 986 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 RBM44Q6ZP01 1051 aaKnown RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 RRAGAQ7L523 313 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 GALNT15Q8N3T1 639 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 EXD3Q8N9H8 876 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 SRFBP1Q8NEF9 429 aaKnown RBP4.92□□□□□ -1.62
CD44-215ENST00000525241 CLEC4CQ8WTT0 213 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 CCT6BQ92526 530 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 TRAPPC9Q96Q05 1148 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 FAM118BQ9BPY3 351 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 HERPUD2Q9BSE4 406 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 PAGR1Q9BTK6 254 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 MYLK2Q9H1R3 596 aa4.92□□□□□ -1.62
CD44-215ENST00000525241 ABHD16BQ9H3Z7 469 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms