RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
TRAPPC4-205ENST00000525079 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.27
TRAPPC4-205ENST00000525079 ZNF292O60281 2723 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 HSF2BPO75031 334 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 IGLV3-25P01717 112 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 APOEP02649 317 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 GLI1P08151 1106 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 CD70P32970 193 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 SOX5P35711 763 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 IL12RB1P42701 662 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 ID4P47928 161 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 SNX16P57768 344 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 ZNF445P59923 1031 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 RPS24P62847 133 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 NME3Q13232 169 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 NNTQ13423 1086 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 ELF2Q15723 593 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 RAP1GAP2Q684P5 730 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 CHST9Q7L1S5 443 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 APTXQ7Z2E3 356 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 ERICH1Q86X53 443 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 DHX40Q8IX18 779 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 LGI2Q8N0V4 545 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 CARNMT1Q8N4J0 409 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 GPR161Q8N6U8 529 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 OLIG1Q8TAK6 271 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 CYB5D2Q8WUJ1 264 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 RNF34Q969K3 372 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 RMDN1Q96DB5 314 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 PRICKLE1Q96MT3 831 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 GABRG3Q99928 467 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 SMOC1Q9H4F8 434 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 ASNSD1Q9NWL6 643 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 DDIT4Q9NX09 232 aa13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 THAP10Q9P2Z0 257 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-205ENST00000525079 LRRC10BA6NIK2 292 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 MAP3K13O43283 966 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 DAB1O75553 588 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 EPN2O95208 641 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 PABPC1P11940 636 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 CHRNB2P17787 502 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 NDUFV2P19404 249 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 TACR2P21452 398 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 CDH5P33151 784 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 P2RY2P41231 377 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 JAM2P57087 298 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 ARID5AQ03989 594 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 ZNF234Q14588 700 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 SF3A2Q15428 464 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 RSPO4Q2I0M5 234 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 MAP7D1Q3KQU3 841 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 MS4A13Q5J8X5 152 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 NAA35Q5VZE5 725 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 SLC26A9Q7LBE3 791 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 PHLDB2Q86SQ0 1253 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 CHSY1Q86X52 802 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 DEFB119Q8N690 84 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 HJURPQ8NCD3 748 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 C18orf8Q96DM3 657 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 LOXL4Q96JB6 756 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 SPAG5Q96R06 1193 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 CD248Q9HCU0 757 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 CALCOCO1Q9P1Z2 691 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 MBD1Q9UIS9 605 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 GGA2Q9UJY4 613 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 NOCTQ9UK39 431 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 RALGAPA1Q6GYQ0 2036 aa13.32□□□□□ -0.28
TRAPPC4-205ENST00000525079 FRYLO94915 3013 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 KCNU1A8MYU2 1149 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 M0QYT0 321 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 ZBTB24O43167 697 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 TEX33O43247 280 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 TIMM44O43615 452 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 HLA-EP13747 358 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 TFE3P19532 575 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 PRKCHP24723 683 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 NOS2P35228 1153 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 STAT1P42224 750 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 DHPSP49366 369 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 NUMBP49757 651 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 NOMO3P69849 1222 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 CREB5Q02930 508 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 EIF4EBP2Q13542 120 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 CSRP2Q16527 193 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 FAM102AQ5T9C2 384 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 MBLAC2Q68D91 279 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 MMS22LQ6ZRQ5 1243 aa13.31□□□□□ -0.28
TRAPPC4-205ENST00000525079 ARMCX6Q7L4S7 300 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms