RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 LINGO3P0C6S8 592 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 ARL4AP40617 200 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 SESN3P58005 492 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 AP2B1P63010 937 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 PPIL2Q13356 520 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 PCBP1Q15365 356 aaKnown RBP eCLIP8.56□□□□□ -1.04
CHD7-202ENST00000524602 Q3C1V9 767 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 FASTKD1Q53R41 847 aaKnown RBP8.56□□□□□ -1.04
CHD7-202ENST00000524602 MBLAC2Q68D91 279 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 NCBP2-AS2Q69YL0 99 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 AAGABQ6PD74 315 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 MTHFD1LQ6UB35 978 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 MYLK4Q86YV6 388 aaPredicted RBP8.56□□□□□ -1.04
CHD7-202ENST00000524602 ULK2Q8IYT8 1036 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 ANKRD52Q8NB46 1076 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 BEST2Q8NFU1 509 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 HSFY1Q96LI6 401 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 RILPQ96NA2 401 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 KCTD15Q96SI1 283 aaPredicted RBP8.56□□□□□ -1.04
CHD7-202ENST00000524602 TSPAN18Q96SJ8 248 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 ZNF184Q99676 751 aaPredicted RBP8.56□□□□□ -1.04
CHD7-202ENST00000524602 DTLQ9NZJ0 730 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 RBPJLQ9UBG7 517 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 USP3Q9Y6I4 520 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 TRIP11Q15643 1979 aa8.56□□□□□ -1.04
CHD7-202ENST00000524602 PDCD11Q14690 1871 aaKnown RBP8.56□□□□□ -1.04
CHD7-202ENST00000524602 GLUD2P49448 558 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CDC42EP1Q00587 391 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CES4AQ5XG92 561 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 ADGRG6Q86SQ4 1221 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 TMEM130Q8N3G9 435 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 MPP5Q8N3R9 675 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 ZC3H15Q8WU90 426 aaKnown RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 SNX27Q96L92 541 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 NR1H4Q96RI1 486 aaPredicted RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 DNAJC28Q9NX36 388 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 DDX43Q9NXZ2 648 aaKnown RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 ETAA1Q9NY74 926 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 SCOCQ9UIL1 159 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 SNX9Q9Y5X1 595 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CCDC195A0A1B0GUA6 201 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CYB561D2O14569 222 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 VTNP04004 478 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 SERPINE1P05121 402 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 ALOX15P16050 662 aaPredicted RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 FRG1Q14331 258 aaKnown RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 ZBTB6Q15916 424 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 EFHC1Q5JVL4 640 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 TMCO4Q5TGY1 634 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 PACS1Q6VY07 963 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CRYBG2Q8N1P7 616 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 PPP4R1Q8TF05 950 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CCDC28BQ9BUN5 200 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 VTA1Q9NP79 307 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHD7-202ENST00000524602 ADAM28Q9UKQ2 775 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 APOBEC2Q9Y235 224 aaKnown RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 KAT6AQ92794 2004 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 RBM47A0AV96 593 aaKnown RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 KLHL33A6NCF5 533 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 MAGEA13PA6NCF6 341 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 KIF3CO14782 793 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 PLIN3O60664 434 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 GABBR2O75899 941 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 GSRP00390 522 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 PDHA1P08559 390 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 SCN1AP35498 2009 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 GJA5P36382 358 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 GARSP41250 739 aaKnown RBP8.55□□□□□ -1.04
CHD7-202ENST00000524602 SLC1A6P48664 564 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 CDK7P50613 346 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 TMEM154Q6P9G4 183 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 ARMCX2Q7L311 632 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 SH3GL3Q99963 347 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 XPNPEP3Q9NQH7 507 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 FAM49BQ9NUQ9 324 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 FZD10Q9ULW2 581 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 RAD54BQ9Y620 910 aa8.55□□□□□ -1.04
CHD7-202ENST00000524602 WDR27A2RRH5 827 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 ALDOAP04075 364 aaKnown RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 KITP10721 976 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 FGF3P11487 239 aaPredicted RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 CCDC130P13994 396 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 ANPEPP15144 967 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 MATKP42679 507 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 ALDH18A1P54886 795 aaKnown RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 RCN2Q14257 317 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 PDK1Q15118 436 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 CCDC153Q494R4 210 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 TEDDM1Q5T9Z0 273 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 RIPOR1Q6ZS17 1223 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 DENND5BQ6ZUT9 1274 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 FASTKD5Q7L8L6 764 aaKnown RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 COLGALT1Q8NBJ5 622 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 GTF3C2Q8WUA4 911 aaPredicted RBP8.54□□□□□ -1.04
CHD7-202ENST00000524602 ISL2Q96A47 359 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 C20orf27Q9GZN8 174 aa8.54□□□□□ -1.04
CHD7-202ENST00000524602 PDGFCQ9NRA1 345 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms