RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 GRAMD4Q6IC98 578 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 PLEKHA7Q6IQ23 1121 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 DNAJC24Q6P3W2 148 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 WDR59Q6PJI9 974 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 SND1Q7KZF4 910 aaKnown RBP eCLIP15.67■□□□□ 0.1
SF3B2-202ENST00000524475 STRADAQ7RTN6 431 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 CENPIQ92674 756 aaPredicted RBP15.67■□□□□ 0.1
SF3B2-202ENST00000524475 TMA16Q96EY4 203 aaKnown RBP15.67■□□□□ 0.1
SF3B2-202ENST00000524475 TBCBQ99426 244 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 PRMT1Q99873 361 aaKnown RBP15.67■□□□□ 0.1
SF3B2-202ENST00000524475 RBM12Q9NTZ6 932 aaKnown RBP15.67■□□□□ 0.1
SF3B2-202ENST00000524475 ABHD10Q9NUJ1 306 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 DNAJC17Q9NVM6 304 aaKnown RBP15.67■□□□□ 0.1
SF3B2-202ENST00000524475 CALCOCO1Q9P1Z2 691 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 ARHGAP20Q9P2F6 1191 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 ADAMTS1Q9UHI8 967 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 FBXO4Q9UKT5 387 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 DMDP11532 3685 aa15.67■□□□□ 0.1
SF3B2-202ENST00000524475 TYW5A2RUC4 315 aaKnown RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 RNF40O75150 1001 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 FTLP02792 175 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 PDGFRAP16234 1089 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 COL9A1P20849 921 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 RRM1P23921 792 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 SLC6A4P31645 630 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 RFC1P35251 1148 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 DGKGP49619 791 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 ZNF75DP51815 510 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 PTPN5P54829 565 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 MRPS21P82921 87 aaKnown RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 DEUP1Q05D60 604 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 MTAPQ13126 283 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 NME3Q13232 169 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 TSR1Q2NL82 804 aaKnown RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 ZNF528Q3MIS6 628 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 MS4A13Q5J8X5 152 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 TTC39BQ5VTQ0 682 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 HJURPQ8NCD3 748 aaPredicted RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 PRSS33Q8NF86 280 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 DDI1Q8WTU0 396 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 RXFP2Q8WXD0 754 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 CFAP57Q96MR6 1250 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 ZNHIT6Q9NWK9 470 aaKnown RBP15.66■□□□□ 0.1
SF3B2-202ENST00000524475 NENFQ9UMX5 172 aa15.66■□□□□ 0.1
SF3B2-202ENST00000524475 MYO15AQ9UKN7 3530 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 MYO18AQ92614 2054 aaKnown RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 ANKRD62A6NC57 917 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 LAMTOR5O43504 91 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 MOCS2O96007 188 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 PLEKP08567 350 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 TFE3P19532 575 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 GPD1P21695 349 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 ZNF143P52747 638 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 MESP2Q0VG99 397 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 TCF15Q12870 199 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 MAMLD1Q13495 774 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 E2F5Q15329 346 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 ANGPT1Q15389 498 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 ASTE1Q2TB18 679 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 CCDC14Q49A88 953 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 C5orf22Q49AR2 442 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 Q6ZS52 159 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 TMC6Q7Z403 805 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 EMC1Q8N766 993 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 NAT16Q8N8M0 369 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 JOSD2Q8TAC2 188 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 USP33Q8TEY7 942 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 FNIP1Q8TF40 1166 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 RNF34Q969K3 372 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 ACDQ96AP0 544 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 C1orf74Q96LT6 269 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 PRICKLE1Q96MT3 831 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 HAPLN3Q96S86 360 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 WDCPQ9H6R7 721 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 SPATA6Q9NWH7 488 aaPredicted RBP15.65■□□□□ 0.1
SF3B2-202ENST00000524475 PLK2Q9NYY3 685 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 SCINQ9Y6U3 715 aa15.65■□□□□ 0.1
SF3B2-202ENST00000524475 SYNJ2BP-COX16A0A087WUM0 186 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 A0A087X0T9 212 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 GOLGA6L7A0A1B0GV03 622 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 AKR1B15C9JRZ8 316 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-202ENST00000524475 FAM228BP0C875 321 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 TACR2P21452 398 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 HOXA6P31267 233 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 KIR2DL1P43626 348 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-202ENST00000524475 KDSRQ06136 332 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 EIF4HQ15056 248 aaKnown RBP15.64■□□□□ 0.09
SF3B2-202ENST00000524475 SLC18A3Q16572 532 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 RFWD3Q6PCD5 774 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 ANKS1BQ7Z6G8 1248 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 KIAA0907Q7Z7F0 614 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-202ENST00000524475 CHSY1Q86X52 802 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 FANCMQ8IYD8 2048 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 MAML2Q8IZL2 1156 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-202ENST00000524475 NELL1Q92832 810 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 FAM126AQ9BYI3 521 aaPredicted RBP15.64■□□□□ 0.09
SF3B2-202ENST00000524475 TKTL2Q9H0I9 626 aa15.64■□□□□ 0.09
SF3B2-202ENST00000524475 COX16Q9P0S2 106 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms