RNA–Protein interactions for RNA: ENST00000523993.5

FAM49B-228, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-228ENST00000523993 SLC16A3O15427 465 aaKnown RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 GDF9O60383 454 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 STX10O60499 249 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ADAM23O75077 832 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TULP3O75386 442 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TRIM49P0CI25 452 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TRIM49CP0CI26 452 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 CCDC192P0DO97 292 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 KRT13P13646 458 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 HNRNPLP14866 589 aaKnown RBP eCLIP6.3□□□□□ -1.43e-9■□□□□ 9.2
FAM49B-228ENST00000523993 MPLP40238 635 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 P2RY2P41231 377 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SLC19A1P41440 591 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 PRCPP42785 496 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SLC6A11P48066 632 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 PXNP49023 591 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 MAP3K7CLP57077 242 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 FKBP3Q00688 224 aaKnown RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 LRRC63Q05C16 580 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ELF2Q15723 593 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 USP39Q53GS9 565 aaKnown RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 EOGTQ5NDL2 527 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ZNF658Q5TYW1 1059 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ARHGAP17Q68EM7 881 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 PM20D1Q6GTS8 502 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SCARA5Q6ZMJ2 495 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 GPRIN1Q7Z2K8 1008 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TRMT11Q7Z4G4 463 aaKnown RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 BBS7Q8IWZ6 715 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SCML4Q8N228 414 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TERB1Q8NA31 727 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SLC4A11Q8NBS3 891 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 PHC3Q8NDX5 983 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 MDGA1Q8NFP4 955 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TSTD1Q8NFU3 115 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 CPLX3Q8WVH0 158 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SEMA4DQ92854 862 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 WBP2Q969T9 261 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ELMO3Q96BJ8 720 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 MED10Q9BTT4 135 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 BRINP2Q9C0B6 783 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 DNAI2Q9GZS0 605 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ARRDC1-AS1Q9H2J1 176 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 NMUR1Q9HB89 426 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ARHGEF4Q9NR80 690 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 VPS45Q9NRW7 570 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 FAM49BQ9NUQ9 324 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
FAM49B-228ENST00000523993 RMND1Q9NWS8 449 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 RAB20Q9NX57 234 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 UBP1Q9NZI7 540 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 WDR35Q9P2L0 1181 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 DEC1Q9P2X7 70 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 HCN2Q9UL51 889 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 TLR6Q9Y2C9 796 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ZNF510Q9Y2H8 683 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 SH3BP1Q9Y3L3 701 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 CABIN1Q9Y6J0 2220 aa6.3□□□□□ -1.4
FAM49B-228ENST00000523993 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 DCDC2BA2VCK2 349 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 ANTXRLA6NF34 631 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 SGK1O00141 431 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 GFRA2O00451 464 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 CETN3O15182 167 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 CYP26A1O43174 497 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 ALDH1A2O94788 518 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 TBX18O95935 607 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 PENKP01210 267 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 CELA3AP09093 270 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 CISD3P0C7P0 127 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 EPB41P11171 864 aaKnown RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 ACO1P21399 889 aaKnown RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 HOXD12P35452 270 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 PPP1R2P41236 205 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 DPP6P42658 865 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 MXI1P50539 228 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 ZNF132P52740 706 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 RAD23BP54727 409 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 COG7P83436 770 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 SHC2P98077 582 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 GOLGA8FQ08AF8 430 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 GOLGA8DPQ0D2H9 430 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 POU4F2Q12837 409 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 IFRD2Q12894 506 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 FOXC1Q12948 553 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 PNOCQ13519 176 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 ENPP2Q13822 863 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 BYSLQ13895 437 aaKnown RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 COL9A2Q14055 689 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 C2orf27AQ580R0 203 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 SNAP47Q5SQN1 464 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 TTC39BQ5VTQ0 682 aaPredicted RBP6.29□□□□□ -1.4
FAM49B-228ENST00000523993 BTBD8Q5XKL5 378 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 CCDC81Q6ZN84 652 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 SCD5Q86SK9 330 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 TADA2BQ86TJ2 420 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 TMEM25Q86YD3 366 aa6.29□□□□□ -1.4
FAM49B-228ENST00000523993 SFTPA1Q8IWL2 248 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms