RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 TNNT1P13805 278 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 KRT4P19013 534 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 WT1P19544 449 aaPredicted RBP4.39□□□□□ -1.71
SKP1-212ENST00000523966 VPS41P49754 854 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 RCAN1P53805 252 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 PDCLQ13371 301 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 SMAD1Q15797 465 aaKnown RBP4.39□□□□□ -1.71
SKP1-212ENST00000523966 CTXN3Q4LDR2 81 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 OLFML1Q6UWY5 402 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 C16orf89Q6UX73 402 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 BCDIN3DQ7Z5W3 292 aaKnown RBP4.39□□□□□ -1.71
SKP1-212ENST00000523966 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.39□□□□□ -1.71
SKP1-212ENST00000523966 AMIGO2Q86SJ2 522 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 GGNQ86UU5 652 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 Q8N1X5 172 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 SIMC1Q8NDZ2 872 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 RILPL2Q969X0 211 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 BBC3Q96PG8 261 aaPredicted RBP4.39□□□□□ -1.71
SKP1-212ENST00000523966 MACROD1Q9BQ69 325 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 ELOVL1Q9BW60 279 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 PDE11AQ9HCR9 933 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 KCNK9Q9NPC2 374 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 G6PC2Q9NQR9 355 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 ZNHIT2Q9UHR6 403 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 ANAPC4Q9UJX5 808 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 SPATA31A1Q5TZJ5 1347 aa4.39□□□□□ -1.71
SKP1-212ENST00000523966 AGAP5A6NIR3 686 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 TMEM232C9JQI7 657 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 POC1B-GALNT4F8VUJ3 575 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 H3BNC9 293 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 M0QZQ0 153 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 USP12O75317 370 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 CYP3A4P08684 503 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 APEHP13798 732 aaKnown RBP4.38□□□□□ -1.71
SKP1-212ENST00000523966 CNTFP26441 200 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 ACVRL1P37023 503 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 AGTR2P50052 363 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 TAS2R50P59544 299 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 UBE3AQ05086 875 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 GOLGA8FQ08AF8 430 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 FAM110CQ1W6H9 321 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 SLC39A5Q6ZMH5 540 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 Q6ZPA2 131 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 LDLRAD3Q86YD5 345 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 UEVLDQ8IX04 471 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 GALNT4Q8N4A0 578 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 NELL1Q92832 810 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 ZNF764Q96H86 408 aaPredicted RBP4.38□□□□□ -1.71
SKP1-212ENST00000523966 RBM17Q96I25 401 aaKnown RBP4.38□□□□□ -1.71
SKP1-212ENST00000523966 SENP7Q9BQF6 1050 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 HTATIP2Q9BUP3 242 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 KRTAP17-1Q9BYP8 105 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 TWSG1Q9GZX9 223 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 NUAK2Q9H093 628 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 KLK15Q9H2R5 256 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 SFXN1Q9H9B4 322 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 RASSF1Q9NS23 344 aa4.38□□□□□ -1.71
SKP1-212ENST00000523966 WDR33Q9C0J8 1336 aaKnown RBP4.38□□□□□ -1.71
SKP1-212ENST00000523966 SAC3D1A6NKF1 404 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 MGST3O14880 152 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 ANP32CO43423 234 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 TSPAN3O60637 253 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 WDHD1O75717 1129 aaPredicted RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 CHRM5P08912 532 aaPredicted RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 CPA1P15085 419 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 ELLP55199 621 aaPredicted RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 KRTAP10-2P60368 255 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 KLF10Q13118 480 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 TRPC3Q13507 836 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 LARS2Q15031 903 aaKnown RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 LCE4AQ5TA78 99 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 RANBP10Q6VN20 620 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 KYAT3Q6YP21 454 aaKnown RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 RASGRP2Q7LDG7 609 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 ANKS1BQ7Z6G8 1248 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 LRRTM4Q86VH4 590 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 HERC6Q8IVU3 1022 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 PNLDC1Q8NA58 520 aaKnown RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 USP38Q8NB14 1042 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 PNISRQ8TF01 805 aaKnown RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 SARAFQ96BY9 339 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 MAELQ96JY0 434 aaKnown RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 ABHD14AQ9BUJ0 271 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 RIOX1Q9H6W3 641 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 ASNSD1Q9NWL6 643 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 SAGE1Q9NXZ1 904 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 GAR1Q9NY12 217 aaKnown RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 SLC25A13Q9UJS0 675 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 SLC13A4Q9UKG4 626 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 DMRT1Q9Y5R6 373 aa4.37□□□□□ -1.71
SKP1-212ENST00000523966 SIRT4Q9Y6E7 314 aaPredicted RBP4.37□□□□□ -1.71
SKP1-212ENST00000523966 CCDC196A0A1B0GTZ2 297 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 STX16-NPEPL1H3BU86 382 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 STX16O14662 325 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 CCNT1O60563 726 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 ENO1P06733 434 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 POLBP06746 335 aa4.36□□□□□ -1.71
SKP1-212ENST00000523966 IFIT1P09914 478 aaKnown RBP4.36□□□□□ -1.71
SKP1-212ENST00000523966 PEPDP12955 493 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms