RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 CEP41Q9BYV8 373 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 SIRPGQ9P1W8 387 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 GINS2Q9Y248 185 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 GMEB1Q9Y692 573 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 CAPN14A8MX76 684 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 MAGEB3O15480 346 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 NPR1P16066 1061 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 ADGRE1Q14246 886 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 USP10Q14694 798 aaKnown RBP9.27□□□□□ -0.93
CSMD1-212ENST00000523387 ZBTB41Q5SVQ8 909 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 JADE1Q6IE81 842 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 RSBN1LQ6PCB5 846 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-212ENST00000523387 C4orf22Q6V702 233 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 STRA8Q7Z7C7 330 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 AHI1Q8N157 1196 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 DHX33Q9H6R0 707 aaKnown RBP9.27□□□□□ -0.93
CSMD1-212ENST00000523387 IL1RL2Q9HB29 575 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 ACSS2Q9NR19 701 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 FAM49BQ9NUQ9 324 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 STK39Q9UEW8 545 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 TEX264Q9Y6I9 313 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 ZNF536O15090 1300 aa9.27□□□□□ -0.93
CSMD1-212ENST00000523387 ZBBXA8MT70 800 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PLIN3O60664 434 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 TRUB2O95900 331 aaKnown RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 ERVK-10P10266 1014 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 IL10P22301 178 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 GP5P40197 560 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 CASP2P42575 452 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 MTTPP55157 894 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 MAPRE2Q15555 327 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PPM1JQ5JR12 505 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PTF1AQ7RTS3 328 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 CMC1Q7Z7K0 106 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 RNF135Q8IUD6 432 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 DSELQ8IZU8 1212 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 MYO1HQ8N1T3 1032 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 RNF149Q8NC42 400 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 STRA6Q9BX79 667 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 ALS2Q96Q42 1657 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 ROBO1Q9Y6N7 1651 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 A0A087WXM4 84 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 A0A096LPK6 155 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 E7ESA3 106 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 CBFA2T3O75081 653 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 CSDE1O75534 798 aaKnown RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 LYPLA2O95372 231 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 ESRRBO95718 433 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 EIF2B2P49770 351 aaKnown RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PDK2Q15119 407 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 SH3D19Q5HYK7 790 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 GLRA4Q5JXX5 417 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 STRIP1Q5VSL9 837 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 HDAC11Q96DB2 347 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 RNF157Q96PX1 679 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PDCD2LQ9BRP1 358 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 TRIM15Q9C019 465 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 XPNPEP1Q9NQW7 623 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PKD2L2Q9NZM6 624 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 SELENONQ9NZV5 590 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PDLIM1O00151 329 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PRKCBP05771 671 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 TTLL12Q14166 644 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 DGKDQ16760 1214 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 SLC39A4Q6P5W5 647 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PACS1Q6VY07 963 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PDZD4Q76G19 769 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 NIPA1Q7RTP0 329 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 IFNEQ86WN2 208 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 NUP93Q8N1F7 819 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 SIX6OS1Q8N1H7 587 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 FAM156AQ8NDB6 213 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 ACMSDQ8TDX5 336 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PRMT6Q96LA8 375 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PRICKLE1Q96MT3 831 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-212ENST00000523387 DNAJC28Q9NX36 388 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 SLC17A6Q9P2U8 582 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 PCDHA11Q9Y5I1 949 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 TAF1P21675 1872 aa9.26□□□□□ -0.93
CSMD1-212ENST00000523387 SF3B1O75533 1304 aaKnown RBP eCLIP9.26□□□□□ -0.931e-7■■■■■ 172.3
CSMD1-212ENST00000523387 KIF13AQ9H1H9 1805 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 RGL2O15211 777 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 ZSCAN9O15535 394 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-212ENST00000523387 SRP72O76094 671 aaKnown RBP9.25□□□□□ -0.93
CSMD1-212ENST00000523387 PIGNO95427 931 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 VNN1O95497 513 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-212ENST00000523387 XRCC1P18887 633 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-212ENST00000523387 CYP2F1P24903 491 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 THOP1P52888 689 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 PTPN11Q06124 597 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-212ENST00000523387 STX5Q13190 355 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 PGM5Q15124 567 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 NEDD8Q15843 81 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 CCDC153Q494R4 210 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 EEPD1Q7L9B9 569 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 FAM47BQ8NA70 645 aa9.25□□□□□ -0.93
CSMD1-212ENST00000523387 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms