RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 SPDYCQ5MJ68 293 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 TDRD10Q5VZ19 366 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 NAIF1Q69YI7 327 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 VSTM1Q6UX27 236 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 SPOCD1Q6ZMY3 1216 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 HS2ST1Q7LGA3 356 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 FILIP1Q7Z7B0 1213 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 RASSF3Q86WH2 238 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 ALLCQ8N6M5 410 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 LRRC52Q8N7C0 313 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF513Q8N8E2 541 aaPredicted RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 C4orf32Q8N8J7 132 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 ENGASEQ8NFI3 743 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 GPBAR1Q8TDU6 330 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 SCFD1Q8WVM8 642 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 RLN3Q8WXF3 142 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 LARP4BQ92615 738 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 RAD54LQ92698 747 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 MYLPFQ96A32 169 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 MMS19Q96T76 1030 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 MMTAG2Q9BU76 263 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 HAPLN2Q9GZV7 340 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 SNX25Q9H3E2 840 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 SMPD4Q9NXE4 827 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 TBC1D14Q9P2M4 693 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 SEL1LQ9UBV2 794 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 GTF3C4Q9UKN8 822 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 L1RE1Q9UN81 338 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 APOBEC2Q9Y235 224 aaKnown RBP6.63□□□□□ -1.35
PABPC1-220ENST00000522658 CPQQ9Y646 472 aa6.63□□□□□ -1.35
PABPC1-220ENST00000522658 CDX4O14627 284 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 FAM189A1O60320 539 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 TADA3O75528 432 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 KAT7O95251 611 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CYP17A1P05093 508 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 HOXB2P14652 356 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 IDEP14735 1019 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 TCF3P15923 654 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 GAP43P17677 238 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 PLCG1P19174 1290 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 BDNFP23560 247 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 LONP1P36776 959 aaKnown RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 P2RY2P41231 377 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 GRIA2P42262 883 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 MAGEA11P43364 429 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 PSMC1P62191 440 aaKnown RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 TNNC1P63316 161 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 GTF2BQ00403 316 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 GAD2Q05329 585 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 ALCAMQ13740 583 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 STARD3Q14849 445 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 SURF1Q15526 300 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 ANO4Q32M45 955 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 PLEKHG6Q3KR16 790 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 WDR45BQ5MNZ6 344 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 C10orf76Q5T2E6 689 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 LRSAM1Q6UWE0 723 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 TMEM150AQ86TG1 271 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 LRRTM3Q86VH5 581 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 SFR1Q86XK3 245 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 BRSK2Q8IWQ3 736 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 SPACA3Q8IXA5 215 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 MINDY1Q8N5J2 469 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 PDZD8Q8NEN9 1154 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 SAAL1Q96ER3 474 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CEP295NLQ96MC4 621 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 HSPA12BQ96MM6 686 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 XPO6Q96QU8 1125 aaKnown RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 FNBP1Q96RU3 617 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CYP2S1Q96SQ9 504 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 MED10Q9BTT4 135 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 MTMR12Q9C0I1 747 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 ELOVL4Q9GZR5 314 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 FAM124BQ9H5Z6 455 aaPredicted RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 FBRSL1Q9HCM7 1045 aaKnown RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 TMLHEQ9NVH6 421 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CFAP97Q9P2B7 532 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 DEC1Q9P2X7 70 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 LSM7Q9UK45 103 aaKnown RBP6.62□□□□□ -1.35
PABPC1-220ENST00000522658 KLK13Q9UKR3 277 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CDH9Q9ULB4 789 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CACNA1GO43497 2377 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 USP24Q9UPU5 2620 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 CHD8Q9HCK8 2581 aa6.62□□□□□ -1.35
PABPC1-220ENST00000522658 ANKRD63C9JTQ0 380 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 SCAMP3O14828 347 aaKnown RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 KIAA0391O15091 583 aaKnown RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 RTN3O95197 1032 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 TOP3BO95985 862 aaKnown RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 ADRB2P07550 413 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 SERPINF2P08697 491 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 IRF1P10914 325 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 GARTP22102 1010 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 OPRD1P41143 372 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 PTGER3P43115 390 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 TNFRSF4P43489 277 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 TOB1P50616 345 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF131P52739 623 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 ARID5AQ03989 594 aa6.61□□□□□ -1.35
PABPC1-220ENST00000522658 ZNF33AQ06730 810 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms