RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 CDH3P22223 829 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 MMP8P22894 467 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 TBX4P57082 545 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 ITGA7Q13683 1181 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 PPP2R5DQ14738 602 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 ABCB5Q2M3G0 1257 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 PLEKHG6Q3KR16 790 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 FAM182AQ5T1J6 154 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 BBS12Q6ZW61 710 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 CENPSQ8N2Z9 138 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 RNF148Q8N7C7 305 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 C12orf43Q96C57 262 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 PLEKHA8Q96JA3 519 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 MFSD14AQ96MC6 490 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 LENG8Q96PV6 779 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 TMEM79Q9BSE2 394 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 EIF2AQ9BY44 585 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 MAN1C1Q9NR34 630 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 ZBTB21Q9ULJ3 1066 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 GPC6Q9Y625 555 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 LY75O60449 1722 aa9.88□□□□□ -0.83
CTNNA1-230ENST00000521724 TMEM150BA6NC51 233 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 C3orf70A6NLC5 250 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 H3BNH8 94 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PSMD12O00232 456 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 CFLARO15519 480 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 ZBTB14O43829 449 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 FUCA1P04066 466 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 CSH1P0DML2 217 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 CSH2P0DML3 217 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PRKCHP24723 683 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SERPINB5P36952 375 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 GABRB2P47870 512 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 EIF2B2P49770 351 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 RARRES1P49788 294 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PKNOX1P55347 436 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TXNL4AP83876 142 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 KLF10Q13118 480 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SEPT6Q14141 434 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 DCAF6Q58WW2 860 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 ZNF362Q5T0B9 420 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 OGFOD2Q6N063 350 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PPP1R2P3Q6NXS1 205 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 C16orf89Q6UX73 402 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 BNC2Q6ZN30 1099 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 NANOGNBQ7Z5D8 188 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 GPR180Q86V85 440 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SCAIQ8N9R8 606 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 KYQ8NBH2 561 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SPATA18Q8TC71 538 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PDCD6IPQ8WUM4 868 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 ITPKCQ96DU7 683 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 ZDHHC15Q96MV8 337 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 HEPHQ9BQS7 1158 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 KIFC3Q9BVG8 833 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 IRF2BPLQ9H1B7 796 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TDRD3Q9H7E2 651 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SMYD2Q9NRG4 433 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TBC1D22BQ9NU19 505 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TUBA8Q9NY65 449 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TBX20Q9UMR3 447 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SCN9AQ15858 1988 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 GSRP00390 522 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 APOEP02649 317 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SERPINE1P05121 402 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TNNI1P19237 187 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 EIF2AK2P19525 551 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 EPHA3P29320 983 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 CDH15P55291 814 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 YWHAZP63104 245 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 TUBA4AP68366 448 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 KCNJ11Q14654 390 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PPP6R3Q5H9R7 873 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 N4BP2L1Q5TBK1 243 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 MFSD4BQ5TF39 518 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 DARS2Q6PI48 645 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 MIER3Q7Z3K6 550 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 RFX6Q8HWS3 928 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 UBR7Q8N806 425 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 DLG3Q92796 817 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SNX27Q96L92 541 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 ST6GALNAC4Q9H4F1 302 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 RAB6BQ9NRW1 208 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PNPLA3Q9NST1 481 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 SUN2Q9UH99 717 aa9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 CNOT11Q9UKZ1 510 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-230ENST00000521724 PRSS51A0A1B0GVH4 220 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 HMX2A2RU54 273 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 C7orf72A4D263 438 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 GIPC1O14908 333 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 LSM1O15116 133 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 SPTLC1O15269 473 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 CALB1P05937 261 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 ZNF26P17031 533 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 PTPN1P18031 435 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 MS4A2Q01362 244 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 FAM102BQ5T8I3 360 aa9.86□□□□□ -0.83
CTNNA1-230ENST00000521724 NANOGP8Q6NSW7 305 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms