RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, human

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VEGFA-222	ENST00000520948	FLT3	P36888	993 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	RUNX3	Q13761	415 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	SLC18A3	Q16572	532 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	PLEKHA7	Q6IQ23	1121 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	ALKBH5	Q6P6C2	394 aa	Known RBP	18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	BNIPL	Q7Z465	357 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	PHLDB2	Q86SQ0	1253 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	ADGRG2	Q8IZP9	1017 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	TTC16	Q8NEE8	873 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	SLC39A13	Q96H72	371 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	NPY6R	Q99463	290 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	ADAM33	Q9BZ11	813 aa		18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.88	■□□□□ 0.61
VEGFA-222	ENST00000520948	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.88	■□□□□ 0.61	4e-6	■□□□□ 10.5
VEGFA-222	ENST00000520948	TRUB2	O95900	331 aa	Known RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	RRM1	P23921	792 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	HOXA6	P31267	233 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	RNASE9	P60153	205 aa	Known RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	GFPT1	Q06210	699 aa	Predicted RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	RING1	Q06587	406 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	SF3A2	Q15428	464 aa	Known RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	EML3	Q32P44	896 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	TMEM196	Q5HYL7	178 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	OTUD1	Q5VV17	481 aa	Predicted RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	NAIF1	Q69YI7	327 aa	Predicted RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	TAC4	Q86UU9	113 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	JOSD2	Q8TAC2	188 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	PLD4	Q96BZ4	506 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	ARRDC1-AS1	Q9H2J1	176 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	METTL5	Q9NRN9	209 aa	Known RBP	18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	RRN3	Q9NYV6	651 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	TBC1D14	Q9P2M4	693 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	TLR6	Q9Y2C9	796 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	SH3BP1	Q9Y3L3	701 aa		18.87	■□□□□ 0.61
VEGFA-222	ENST00000520948	C2CD4B	A6NLJ0	364 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	IRAK2	O43187	625 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	MSI1	O43347	362 aa	Known RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	RPP40	O75818	363 aa	Known RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	ENDOD1	O94919	500 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	GJB6	O95452	261 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	EGF	P01133	1207 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	IRF1	P10914	325 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	KRT3	P12035	628 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	RFC1	P35251	1148 aa	Predicted RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	PDGFRL	Q15198	375 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	AASDH	Q4L235	1098 aa	Predicted RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	CCDC122	Q5T0U0	273 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	KBTBD6	Q86V97	674 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	SPC24	Q8NBT2	197 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	GAB3	Q8WWW8	586 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	OTUB2	Q96DC9	234 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	PGAP3	Q96FM1	320 aa	Predicted RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	FCRL2	Q96LA5	508 aa	Predicted RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	SERPINB11	Q96P15	392 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	DCLK3	Q9C098	648 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	DUS2	Q9NX74	493 aa	Known RBP	18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	CALCOCO1	Q9P1Z2	691 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	SLC8A2	Q9UPR5	921 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	WNT6	Q9Y6F9	365 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	SPAG17	Q6Q759	2223 aa		18.86	■□□□□ 0.61
VEGFA-222	ENST00000520948	SLC9A3R1	O14745	358 aa	Predicted RBP	18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	RNF40	O75150	1001 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	HMBS	P08397	361 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	MYBL1	P10243	752 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	TFE3	P19532	575 aa	Predicted RBP	18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	TBX4	P57082	545 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	MAMLD1	Q13495	774 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	SLC25A52	Q3SY17	297 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	BBS7	Q8IWZ6	715 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	EMC1	Q8N766	993 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	ADAM32	Q8TC27	787 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	AZIN2	Q96A70	460 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	CCDC42	Q96M95	316 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	SELENOO	Q9BVL4	669 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	STOML2	Q9UJZ1	356 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	AGO1	Q9UL18	857 aa	Known RBP	18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	ZNF510	Q9Y2H8	683 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	KIAA1549L	Q6ZVL6	1849 aa		18.85	■□□□□ 0.61
VEGFA-222	ENST00000520948	CACNA1B	Q00975	2339 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	SDK1	Q7Z5N4	2213 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	TRDMT1	O14717	391 aa	Known RBP	18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	LCA5L	O95447	670 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	GBP1	P32455	592 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	PTPN9	P43378	593 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	GALC	P54803	685 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	RPL7A	P62424	266 aa	Known RBP	18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	CCDC14	Q49A88	953 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	TMEM139	Q8IV31	216 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	FAM217A	Q8IXS0	508 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	C12orf50	Q8NA57	414 aa	Predicted RBP	18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	RXFP2	Q8WXD0	754 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	CENPI	Q92674	756 aa	Predicted RBP	18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	TRIM11	Q96F44	468 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	HHIP	Q96QV1	700 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	TBCB	Q99426	244 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	RXFP3	Q9NSD7	469 aa		18.84	■□□□□ 0.61
VEGFA-222	ENST00000520948	PARVA	Q9NVD7	372 aa		18.84	■□□□□ 0.61

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