RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 MAGEA3P43357 314 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 SERPINB9P50453 376 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 SCNN1GP51170 649 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 MAP3K7CLP57077 242 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 TSPY1Q01534 308 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 DNAJC3Q13217 504 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 ITGA7Q13683 1181 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 LPIN1Q14693 890 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 PRKD1Q15139 912 aaPredicted RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 SEPT7Q16181 437 aaKnown RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 QPCTQ16769 361 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 PARP6Q2NL67 630 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 MSS51Q4VC12 460 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 RAB6CQ53S08 254 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 MAP3K21Q5TCX8 1036 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 NUGGCQ68CJ6 796 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 NCBP2-AS2Q69YL0 99 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 C4orf50Q6ZRC1 276 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 SLC26A11Q86WA9 606 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 CCDC185Q8N715 623 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 PPP1R13LQ8WUF5 828 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 PCED1BQ96HM7 432 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 SUSD3Q96L08 255 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 PAFAH2Q99487 392 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 GAS2L1Q99501 681 aaPredicted RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 VAT1Q99536 393 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 SMOQ99835 787 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 ULBP1Q9BZM6 244 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 RAB6CQ9H0N0 254 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 AGO3Q9H9G7 860 aaKnown RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 ETNK1Q9HBU6 452 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 HMX1Q9NP08 348 aaPredicted RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 DMAP1Q9NPF5 467 aaPredicted RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 CTNNAL1Q9UBT7 734 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 ZC3H7BQ9UGR2 993 aaKnown RBP10.27□□□□□ -0.76
SPARC-202ENST00000520687 TRHDEQ9UKU6 1024 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 OGDHLQ9ULD0 1010 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 PCDHB8Q9UN66 801 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 ARL2BPQ9Y2Y0 163 aa10.27□□□□□ -0.76
SPARC-202ENST00000520687 SCN1AP35498 2009 aa10.27□□□□□ -0.77
SPARC-202ENST00000520687 TCRBV7S3A2A0A539 114 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 TCP11X1B4DZS4 312 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 TMEM189-UBE2V1I3L0A0 370 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 EEF2KO00418 725 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 PSMD3O43242 534 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 HCRTO43612 131 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 TYROBPO43914 113 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 KRT37O76014 449 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 CTSHP09668 335 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 PRKAR2AP13861 404 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 TFE3P19532 575 aaPredicted RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 ACAT1P24752 427 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 SSTR1P30872 391 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 CD52P31358 61 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 SERPINB6P35237 376 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 IFNAR2P48551 515 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 CXCR3P49682 368 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 YWHAGP61981 247 aaKnown RBP eCLIP10.26□□□□□ -0.77
SPARC-202ENST00000520687 COG7P83436 770 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 GBE1Q04446 702 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 DPYSQ14117 519 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 SHHQ15465 462 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 PDK4Q16654 411 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 TRIM71Q2Q1W2 868 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 TIGD5Q53EQ6 642 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 HHATQ5VTY9 493 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 GLB1LQ6UWU2 654 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 RFX8Q6ZV50 586 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 ZNF598Q86UK7 904 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 LRRC6Q86X45 466 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 FAM131BQ86XD5 332 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 ECHDC2Q86YB7 292 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 ANKRD42Q8N9B4 389 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 DCAKDQ8WVC6 231 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 PPP1R2P1Q96PQ5 205 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 TGS1Q96RS0 853 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 EPAS1Q99814 870 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 EBNA1BP2Q99848 306 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 ADAM2Q99965 735 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 FTHL17Q9BXU8 183 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 OSBPL2Q9H1P3 480 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 VPS11Q9H270 941 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 EPHX3Q9H6B9 360 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 C10orf88Q9H8K7 445 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 RGS18Q9NS28 235 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 MIOSQ9NXC5 875 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 IGSF9Q9P2J2 1179 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 STARD13Q9Y3M8 1113 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 FRMPD3Q5JV73 1810 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 CDH23Q9H251 3354 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 TCRBV9S1A1TA0A576 114 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 MYBPHLA2RUH7 354 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 HHLA1C9JL84 531 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 CLDN5O00501 218 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 KRT38O76015 456 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 B3GAT3O94766 335 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 OAS1P00973 400 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 APRTP07741 180 aa10.26□□□□□ -0.77
SPARC-202ENST00000520687 SNRPAP09012 282 aaKnown RBP10.26□□□□□ -0.77
SPARC-202ENST00000520687 ALADP13716 330 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms