RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 DMAP1Q9NPF5 467 aaPredicted RBP10.45□□□□□ -0.74
MCF2-209ENST00000520602 VANGL2Q9ULK5 521 aa10.45□□□□□ -0.74
MCF2-209ENST00000520602 SNX10Q9Y5X0 201 aa10.45□□□□□ -0.74
MCF2-209ENST00000520602 YJEFN3A6XGL0 299 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 MEIS3P2A8K0S8 358 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 E7ENQ6 273 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 MDM4O15151 490 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 CRCPO75575 148 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 KCNA4P22459 653 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 L1CAMP32004 1257 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 ADRA1BP35368 520 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 EFEMP1Q12805 493 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 MAPRE1Q15691 268 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 ARHGAP17Q68EM7 881 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 CHADLQ6NUI6 762 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 STRADAQ7RTN6 431 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 FAM228AQ86W67 206 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 PDCD6IPQ8WUM4 868 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 CCT6BQ92526 530 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 PTPRN2Q92932 1015 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 EBNA1BP2Q99848 306 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 MECRQ9BV79 373 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 TRIM62Q9BVG3 475 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 SPECC1L-ADORA2AF8WAN1 911 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 ASGR1P07306 291 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 OR4Q2P0C623 313 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 HOXD10P28358 340 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 PTPN9P43378 593 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 EPHB1P54762 984 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 POU6F1Q14863 301 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 TSNAXIP1Q2TAA8 658 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 SLC39A12Q504Y0 691 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 FASTKD1Q53R41 847 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 C10orf120Q5SQS8 335 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 FAM117BQ6P1L5 589 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 MAMDC4Q6UXC1 1216 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 UNC5AQ6ZN44 842 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 OSTM1Q86WC4 334 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 TMEM86AQ8N2M4 240 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 UBR7Q8N806 425 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 STK32AQ8WU08 396 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 SGF29Q96ES7 293 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 FAM161BQ96MY7 647 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 TMEM120AQ9BXJ8 343 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 VRTNQ9H8Y1 702 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 LRRC40Q9H9A6 602 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 CYP4F11Q9HBI6 524 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 ARHGEF4Q9NR80 690 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 IARS2Q9NSE4 1012 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 DTLQ9NZJ0 730 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 MFHAS1Q9Y4C4 1052 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 SSC5DA1L4H1 1573 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 C2CD2LO14523 706 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 MTSS1O43312 755 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 DUSP11O75319 330 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 STAMBPO95630 424 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 GSTA1P08263 222 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 GSTA2P09210 222 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 AVPR1AP37288 418 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 GLRBP48167 497 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 PITX1P78337 314 aaPredicted RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 NAPEPLDQ6IQ20 393 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 TRMT10BQ6PF06 316 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 HFE2Q6ZVN8 426 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 OTOAQ7RTW8 1153 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 PRPF39Q86UA1 669 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 CCDC117Q8IWD4 279 aaPredicted RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 DCP1BQ8IZD4 617 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 PCSK9Q8NBP7 692 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 EVPLQ92817 2033 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 KAT2BQ92831 832 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 RMDN2Q96LZ7 410 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 HNRNPABQ99729 332 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 TASP1Q9H6P5 420 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 CATSPERBQ9H7T0 1116 aa10.44□□□□□ -0.74
MCF2-209ENST00000520602 NOP53Q9NZM5 478 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 IPO11Q9UI26 975 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 MTO1Q9Y2Z2 717 aaKnown RBP10.44□□□□□ -0.74
MCF2-209ENST00000520602 ARL5CA6NH57 179 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 NEMP1O14524 444 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 AQP5P55064 265 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 MGAT5Q09328 741 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CRHR2Q13324 411 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CRYBG2Q8N1P7 616 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 PLCD3Q8N3E9 789 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 MICAL1Q8TDZ2 1067 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CCDC68Q9H2F9 335 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CNTN3Q9P232 1028 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 ARMCX1Q9P291 453 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 SFMBT1Q9UHJ3 866 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CDH9Q9ULB4 789 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CLUHO75153 1309 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 POLR2AP24928 1970 aaKnown RBP10.43□□□□□ -0.74
MCF2-209ENST00000520602 LOC100653049A0A140TA62 436 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 BCLAF3A2AJT9 711 aaKnown RBP10.43□□□□□ -0.74
MCF2-209ENST00000520602 B2RBV5 119 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 CFLARO15519 480 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 GPR32O75388 356 aa10.43□□□□□ -0.74
MCF2-209ENST00000520602 KRT34O76011 436 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms