RNA–Protein interactions for RNA: ENST00000520115.5

VDAC3-205, Transcript of voltage dependent anion channel 3, humanhuman

TSL 4

Gene VDAC3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-205ENST00000520115 STKLD1Q8NE28 680 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 HASPINQ8TF76 798 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 CPT1BQ92523 772 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 ALKBH8Q96BT7 664 aaKnown RBP13.1□□□□□ -0.31
VDAC3-205ENST00000520115 TBC1D31Q96DN5 1066 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 TMEM169Q96HH4 297 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 ZNF558Q96NG5 402 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 TTLL2Q9BWV7 592 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 TKTL2Q9H0I9 626 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 USP29Q9HBJ7 922 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 SAYSD1Q9NPB0 183 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 NINJ2Q9NZG7 142 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 IGSF9Q9P2J2 1179 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 PPARGC1AQ9UBK2 798 aaKnown RBP13.1□□□□□ -0.31
VDAC3-205ENST00000520115 UXTQ9UBK9 157 aaPredicted RBP13.1□□□□□ -0.31
VDAC3-205ENST00000520115 OR12D3Q9UGF7 316 aa13.1□□□□□ -0.31
VDAC3-205ENST00000520115 XPO7Q9UIA9 1087 aaKnown RBP13.1□□□□□ -0.31
VDAC3-205ENST00000520115 HBS1LQ9Y450 684 aaKnown RBP13.1□□□□□ -0.31
VDAC3-205ENST00000520115 EXOC1LA0A1B0GW35 172 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.09□□□□□ -0.31
VDAC3-205ENST00000520115 WASH4PA8MWX3 477 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 I3L4J1 428 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 DCLK1O15075 740 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TIMP1P01033 207 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 SOD2P04179 222 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 ITGB1P05556 798 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 GOT1P17174 413 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 GBP2P32456 591 aaPredicted RBP13.09□□□□□ -0.31
VDAC3-205ENST00000520115 NDUFV1P49821 464 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
VDAC3-205ENST00000520115 GALNT2Q10471 571 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 PRPSAP1Q14558 356 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 LLGL1Q15334 1064 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TRIM60Q495X7 471 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TTMPQ5BVD1 217 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TNFAIP8L3Q5GJ75 292 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 SYPL2Q5VXT5 272 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 C1orf228Q6PIY5 440 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 KCNT2Q6UVM3 1135 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TAC4Q86UU9 113 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 SCN4BQ8IWT1 228 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 UNC45BQ8IWX7 931 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 PALM2Q8IXS6 379 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 ATP6V0D2Q8N8Y2 350 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TOP1MTQ969P6 601 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 CYTH2Q99418 400 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 EPB41L4BQ9H329 900 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 CENPHQ9H3R5 247 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 SSU72Q9NP77 194 aaKnown RBP13.09□□□□□ -0.31
VDAC3-205ENST00000520115 ETNK2Q9NVF9 386 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 DNAJB4Q9UDY4 337 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
VDAC3-205ENST00000520115 IKBKGQ9Y6K9 419 aa13.09□□□□□ -0.31
VDAC3-205ENST00000520115 TTC3P53804 2025 aa13.08□□□□□ -0.31
VDAC3-205ENST00000520115 CREB3O43889 395 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 ACSL3O95573 720 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 EFEMP2O95967 443 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 CSH1P0DML2 217 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 CSH2P0DML3 217 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 SRGAP2BP0DMP2 458 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 HAPLN1P10915 354 aaPredicted RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 PFKLP17858 780 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 CNTFP26441 200 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 EPHB2P29323 1055 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 LMAN1P49257 510 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 PDIA2Q13087 525 aaKnown RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 GPNMBQ14956 572 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 MTFR1Q15390 333 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 CA9Q16790 459 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 SNX30Q5VWJ9 437 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 GPRIN1Q7Z2K8 1008 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 LINC00523Q86TU6 105 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 LRRTM3Q86VH5 581 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 ZBED8Q8IZ13 594 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 TRMT2BQ96GJ1 504 aaKnown RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 IGSF21Q96ID5 467 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 BTN2A3PQ96KV6 586 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 DDX50Q9BQ39 737 aaKnown RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 LPIN3Q9BQK8 851 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 OSBPL7Q9BZF2 842 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 UBE2OQ9C0C9 1292 aaKnown RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 FAM107BQ9H098 131 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 ACSS3Q9H6R3 686 aa13.08□□□□□ -0.32
VDAC3-205ENST00000520115 PSMC3IPQ9P2W1 217 aaPredicted RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 SMG5Q9UPR3 1016 aaKnown RBP13.08□□□□□ -0.32
VDAC3-205ENST00000520115 MAGEB16A2A368 324 aa13.07□□□□□ -0.32
VDAC3-205ENST00000520115 MTMR11A4FU01 709 aa13.07□□□□□ -0.32
VDAC3-205ENST00000520115 LATS1O95835 1130 aa13.07□□□□□ -0.32
VDAC3-205ENST00000520115 URODP06132 367 aa13.07□□□□□ -0.32
VDAC3-205ENST00000520115 ERCC2P18074 760 aa13.07□□□□□ -0.32
VDAC3-205ENST00000520115 IBSPP21815 317 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms