RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 EPHB3P54753 998 aa15□□□□□ -0.01
CLN8-204ENST00000519254 GPS1Q13098 491 aa15□□□□□ -0.01
CLN8-204ENST00000519254 NME3Q13232 169 aa15□□□□□ -0.01
CLN8-204ENST00000519254 PLD1Q13393 1074 aa15□□□□□ -0.01
CLN8-204ENST00000519254 PPP6R3Q5H9R7 873 aaPredicted RBP15□□□□□ -0.01
CLN8-204ENST00000519254 CEP85LQ5SZL2 805 aa15□□□□□ -0.01
CLN8-204ENST00000519254 SCD5Q86SK9 330 aa15□□□□□ -0.01
CLN8-204ENST00000519254 FAM131BQ86XD5 332 aa15□□□□□ -0.01
CLN8-204ENST00000519254 UNC45BQ8IWX7 931 aa15□□□□□ -0.01
CLN8-204ENST00000519254 KREMEN2Q8NCW0 462 aa15□□□□□ -0.01
CLN8-204ENST00000519254 FAM204AQ9H8W3 233 aa15□□□□□ -0.01
CLN8-204ENST00000519254 FBXW11Q9UKB1 542 aa15□□□□□ -0.01
CLN8-204ENST00000519254 NUDT5Q9UKK9 219 aa15□□□□□ -0.01
CLN8-204ENST00000519254 FZD10Q9ULW2 581 aa15□□□□□ -0.01
CLN8-204ENST00000519254 RANBP2P49792 3224 aaKnown RBP15□□□□□ -0.01
CLN8-204ENST00000519254 TNRC18O15417 2968 aaPredicted RBP15□□□□□ -0.01
CLN8-204ENST00000519254 M0QYT0 321 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 RFXAPO00287 272 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 DNALI1O14645 258 aaPredicted RBP14.99□□□□□ -0.01
CLN8-204ENST00000519254 APOL1O14791 398 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 C8AP07357 584 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 NUDT17P0C025 328 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 RBP3P10745 1247 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 RGS19P49795 217 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 CLCN4P51793 760 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 LILRA6Q6PI73 481 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 C1orf228Q6PIY5 440 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 CCDC25Q86WR0 208 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 PYROXD2Q8N2H3 581 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.99□□□□□ -0.01
CLN8-204ENST00000519254 P3H4Q92791 437 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 PWWP2AQ96N64 755 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 LRRC4CQ9HCJ2 640 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 PIGVQ9NUD9 493 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 OSER1Q9NX31 292 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 IL37Q9NZH6 218 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 MAFFQ9ULX9 164 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 GREB1Q4ZG55 1949 aa14.99□□□□□ -0.01
CLN8-204ENST00000519254 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 MCF2LO15068 1137 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CLASP2O75122 1294 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 IFNB1P01574 187 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 LRG1P02750 347 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CSH1P0DML2 217 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CSH2P0DML3 217 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 TGM2P21980 687 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 RDXP35241 583 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 SLC29A2Q14542 456 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CCDC149Q6ZUS6 474 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 B4GALNT4Q76KP1 1039 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 ADGRD2Q7Z7M1 963 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 MON1AQ86VX9 555 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 PSTKQ8IV42 348 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 ZNF512Q96ME7 567 aaPredicted RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 TRIM62Q9BVG3 475 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 TSPYL1Q9H0U9 437 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 TMBIM4Q9HC24 238 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 TMPRSS4Q9NRS4 437 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 ABCC13Q9NSE7 274 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CWC15Q9P013 229 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 TPX2Q9ULW0 747 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 SHBGP04278 402 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 EPCAMP16422 314 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 HMGA1P17096 107 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 RPL22P35268 128 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 DEUP1Q05D60 604 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 RNASEH2BQ5TBB1 312 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 PDE12Q6L8Q7 609 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 ZC3H18Q86VM9 953 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 ARHGAP18Q8N392 663 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 FAM71DQ8N9W8 422 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 RNF139Q8WU17 664 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 RSAD2Q8WXG1 361 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CEP295NLQ96MC4 621 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 CSPG4P5Q96PW8 444 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 TTLL2Q9BWV7 592 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 WDR6Q9NNW5 1121 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 MAN1C1Q9NR34 630 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 TLR8Q9NR97 1041 aaKnown RBP14.98□□□□□ -0.01
CLN8-204ENST00000519254 COMMD8Q9NX08 183 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 DDIT4Q9NX09 232 aa14.98□□□□□ -0.01
CLN8-204ENST00000519254 FAM92AA1XBS5 289 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 RIPK2O43353 540 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 PPM1LQ5SGD2 360 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 DENND2CQ68D51 928 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 KCTD16Q68DU8 428 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 DARS2Q6PI48 645 aaKnown RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 TRMT10CQ7L0Y3 403 aaKnown RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 DNAJB7Q7Z6W7 309 aaPredicted RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 TAC4Q86UU9 113 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 ZCCHC9Q8N567 271 aaKnown RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 DQX1Q8TE96 717 aaKnown RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 SLC22A17Q8WUG5 538 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 PGAP3Q96FM1 320 aaPredicted RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 CDC42EP4Q9H3Q1 356 aaKnown RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 USP29Q9HBJ7 922 aa14.97□□□□□ -0.01
CLN8-204ENST00000519254 DNAJC17Q9NVM6 304 aaKnown RBP14.97□□□□□ -0.01
CLN8-204ENST00000519254 SFMBT1Q9UHJ3 866 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms