RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 SPERTQ8NA61 448 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 MINDY2Q8NBR6 621 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SLC35B2Q8TB61 432 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 DHX38Q92620 1227 aaKnown RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ATP6V1E2Q96A05 226 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 FAM84BQ96KN1 310 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 LENG8Q96PV6 779 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SORT1Q99523 831 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 PARVAQ9NVD7 372 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 TMEM9Q9P0T7 183 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 XPO7Q9UIA9 1087 aaKnown RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ZNRF3Q9ULT6 936 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ATP11BQ9Y2G3 1177 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 CYP3A7-CYP3A51PA0A087WV96 503 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 CSPG5O95196 566 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 KRT1P04264 644 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 CYP3A7P24462 503 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 CRHR1P34998 444 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 RPL22P35268 128 aaKnown RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 GRIK5Q16478 980 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SHROOM1Q2M3G4 852 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 INAVAQ3KP66 663 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 BTBD8Q5XKL5 378 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 DSG4Q86SJ6 1040 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 RNF148Q8N7C7 305 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 NEDD1Q8NHV4 660 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SEMA4DQ92854 862 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 USP13Q92995 863 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 MED30Q96HR3 178 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SLC4A5Q9BY07 1137 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 RTFDC1Q9BY42 306 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 TP63Q9H3D4 680 aaPredicted RBP13.92□□□□□ -0.18
PABPC1-208ENST00000519004 SCUBE2Q9NQ36 999 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 RAB20Q9NX57 234 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ZBTB21Q9ULJ3 1066 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 NHSQ6T4R5 1651 aa13.92□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF536O15090 1300 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 AKAP10O43572 662 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 TIMM44O43615 452 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 CCNA2P20248 432 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 CXCR2P25025 360 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ADSLP30566 484 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 OPRL1P41146 370 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 DPP6P42658 865 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ACADSBP45954 432 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 RPL10AP62906 217 aaKnown RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 PRAMEP78395 509 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 GRSF1Q12849 480 aaKnown RBP eCLIP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 SLC10A2Q12908 348 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 FSCBQ5H9T9 825 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 FAM117BQ6P1L5 589 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 TTC33Q6PID6 262 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 SPOCD1Q6ZMY3 1216 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 LRRC49Q8IUZ0 686 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ADGRF2Q8IZF7 708 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 LRTOMTQ8WZ04 291 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 TFAP2CQ92754 450 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF486Q96H40 463 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF347Q96SE7 839 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 EYA3Q99504 573 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 PCIF1Q9H4Z3 704 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 POLR1BQ9H9Y6 1135 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ZNF652Q9Y2D9 606 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 TEX264Q9Y6I9 313 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 ARRB2P32121 409 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 NKX2-5P52952 324 aaPredicted RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 KRT76Q01546 638 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 CAVIN4Q5BKX8 364 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 MTX3Q5HYI7 312 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 C1orf186Q6ZWK4 172 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 GALNT13Q8IUC8 556 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 CTAGE3PQ8IX95 158 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 NDUFAF2Q8N183 169 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 KYQ8NBH2 561 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 RNF38Q9H0F5 515 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 FAM96AQ9H5X1 160 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 PNPLA8Q9NP80 782 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 IPO11Q9UI26 975 aaKnown RBP13.91□□□□□ -0.18
PABPC1-208ENST00000519004 SLC27A5Q9Y2P5 690 aa13.91□□□□□ -0.18
PABPC1-208ENST00000519004 hCG_1818297A0A087WSY0 165 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 BCL10O95999 233 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 GNAO1P09471 354 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 ME2P23368 584 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 MAP4P27816 1152 aaKnown RBP13.9□□□□□ -0.18
PABPC1-208ENST00000519004 NR4A2P43354 598 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 MAPK10P53779 464 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 IFITM3Q01628 133 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SPCS2Q15005 226 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 PGS1Q32NB8 556 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 SUSD4Q5VX71 490 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 MON1BQ7L1V2 547 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 ANKRD13BQ86YJ7 626 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 FAM20CQ8IXL6 584 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 FAM178BQ8IXR5 827 aa13.9□□□□□ -0.18
PABPC1-208ENST00000519004 CLIP4Q8N3C7 705 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms