RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 C16orf71Q8IYS4 520 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 ANKRD42Q8N9B4 389 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 ADPRHL1Q8NDY3 354 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 OR6Y1Q8NGX8 325 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 HMGB4Q8WW32 186 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 TRMT61AQ96FX7 289 aaKnown RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF764Q96H86 408 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 NPAS1Q99742 590 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 SENP7Q9BQF6 1050 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 ELOVL1Q9BW60 279 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 NUAK2Q9H093 628 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 TMLHEQ9NVH6 421 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 NDUFAF4Q9P032 175 aa4.19□□□□□ -1.74
VPS13B-207ENST00000518569 FNDC1Q4ZHG4 1894 aaPredicted RBP4.19□□□□□ -1.74
VPS13B-207ENST00000518569 MANSC4A6NHS7 340 aaPredicted RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 PRYO14603 147 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 PPP6R2O75170 966 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 RNF8O76064 485 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 SGPL1O95470 568 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 TUBB4AP04350 444 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 ENO1P06733 434 aaKnown RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 FBLP22087 321 aaKnown RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 NDUFS1P28331 727 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 SLC8A1P32418 973 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 GRK5P34947 590 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 AGTR2P50052 363 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF84P51523 738 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 FOXL2P58012 376 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 FOXF2Q12947 444 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 FAM110CQ1W6H9 321 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 CC2D1BQ5T0F9 858 aaKnown RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 TMEM88Q6PEY1 159 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 SLC39A5Q6ZMH5 540 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 LDHAL6AQ6ZMR3 332 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 ZNF782Q6ZMW2 699 aaPredicted RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 EXOC8Q8IYI6 725 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 SPPL3Q8TCT6 385 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 THAP4Q8WY91 577 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 DPF1Q92782 380 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D20Q96BZ9 403 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 TRAPPC9Q96Q05 1148 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 MECRQ9BV79 373 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 BRD8Q9H0E9 1235 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 ELAC1Q9H777 363 aaKnown RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 PTGFRNQ9P2B2 879 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 KIF17Q9P2E2 1029 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 SLC12A4Q9UP95 1085 aa4.18□□□□□ -1.74
VPS13B-207ENST00000518569 HEMK1Q9Y5R4 338 aaPredicted RBP4.18□□□□□ -1.74
VPS13B-207ENST00000518569 C16orf96A6NNT2 1141 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 H0Y3Z8 333 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 M0QYT0 321 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 IRAK2O43187 625 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 USP12O75317 370 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 ALDOAP04075 364 aaKnown RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 CYP2D6P10635 497 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 HSD3B1P14060 373 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 TACR3P29371 465 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 SERPINA4P29622 427 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 ADD2P35612 726 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 STAT6P42226 847 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 CCT5P48643 541 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 EFR3AQ14156 821 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 RPS6KA2Q15349 733 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 TMEM119Q4V9L6 283 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 MEX3CQ5U5Q3 659 aaKnown RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 ANKRD40Q6AI12 368 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 DGAT2L7PQ6IED9 249 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 GALNT16Q8N428 558 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 SLC2A12Q8TD20 617 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 RUBCNQ92622 972 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 CELF1Q92879 486 aaKnown RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 TRIM63Q969Q1 353 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 C3orf49Q96BT1 292 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 GATA5Q9BWX5 397 aaPredicted RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 TWSG1Q9GZX9 223 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 SEPSECSQ9HD40 501 aaKnown RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 ERVK-5Q9HDB9 667 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 G6PC2Q9NQR9 355 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 ARL8BQ9NVJ2 186 aa4.17□□□□□ -1.74
VPS13B-207ENST00000518569 TRPC5Q9UL62 973 aaPredicted RBP4.17□□□□□ -1.74
VPS13B-207ENST00000518569 POLR2AP24928 1970 aaKnown RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3DA0A087WVF3 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3IA0A087WXS9 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3EA0A087X179 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3KA0A087X1G2 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3BA6NDS4 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3FA6NER0 549 aaPredicted RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 HMX3A6NHT5 357 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3LB9A6J9 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 PPP6CO00743 305 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TFRCP02786 760 aaKnown RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TBC1D3HP0C7X1 549 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 VPS41P49754 854 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 FAM3BP58499 235 aaPredicted RBP4.16□□□□□ -1.74
VPS13B-207ENST00000518569 TAS2R50P59544 299 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 HSF1Q00613 529 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 DMWDQ09019 674 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 PPFIA1Q13136 1202 aa4.16□□□□□ -1.74
VPS13B-207ENST00000518569 DCTN1Q14203 1278 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms