RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ANKRD45Q5TZF3 282 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 ANKS1BQ7Z6G8 1248 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 AMIGO2Q86SJ2 522 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 USP38Q8NB14 1042 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 SEMA6DQ8NFY4 1073 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 GPR150Q8NGU9 434 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 ZNF398Q8TD17 642 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 C3orf49Q96BT1 292 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 ZNF845Q96IR2 970 aaPredicted RBP3.45□□□□□ -1.86
SKP1-203ENST00000517625 ZSCAN31Q96LW9 406 aaPredicted RBP3.45□□□□□ -1.86
SKP1-203ENST00000517625 ASB2Q96Q27 587 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PIGSQ96S52 555 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PYM1Q9BRP8 204 aaKnown RBP3.45□□□□□ -1.86
SKP1-203ENST00000517625 BRD8Q9H0E9 1235 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 IL17RBQ9NRM6 502 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 PI4KBQ9UBF8 816 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 GPR52Q9Y2T5 361 aa3.45□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3DA0A087WVF3 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3IA0A087WXS9 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3EA0A087X179 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3KA0A087X1G2 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3BA6NDS4 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3FA6NER0 549 aaPredicted RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3LB9A6J9 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 M0QZQ0 153 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 FYB1O15117 783 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 NUDT3O95989 172 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 PRKCGP05129 697 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3HP0C7X1 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 ALADP13716 330 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TNNT1P13805 278 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 GYS1P13807 737 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 ATF7P17544 494 aaPredicted RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 CERS1P27544 350 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 HOXD12P35452 270 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TAS2R50P59544 299 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 RPL15P61313 204 aaKnown RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 TIGD6Q17RP2 521 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 GALNTL6Q49A17 601 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 KIAA1614Q5VZ46 1190 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3GQ6DHY5 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3CQ6IPX1 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 ANO7Q6IWH7 933 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 C16orf89Q6UX73 402 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 SLC39A5Q6ZMH5 540 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 ZNF813Q6ZN06 617 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 RASGRP2Q7LDG7 609 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 RD3Q7Z3Z2 195 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 MOGAT3Q86VF5 341 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 ARHGEF25Q86VW2 580 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 ADGRG3Q86Y34 549 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TBC1D3Q8IZP1 549 aaPredicted RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 PTGR2Q8N8N7 351 aaPredicted RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 TRMT61AQ96FX7 289 aaKnown RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 RITA1Q96K30 269 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 MACROD1Q9BQ69 325 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 POLR3GLQ9BT43 218 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 HTATIP2Q9BUP3 242 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TRIM2Q9C040 744 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 TAF1DQ9H5J8 278 aaPredicted RBP3.44□□□□□ -1.86
SKP1-203ENST00000517625 GJD2Q9UKL4 321 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 GTF2A1LQ9UNN4 478 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 PCDHB2Q9Y5E7 798 aa3.44□□□□□ -1.86
SKP1-203ENST00000517625 BMP5P22003 454 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 SFPQP23246 707 aaKnown RBP eCLIP3.43□□□□□ -1.86
SKP1-203ENST00000517625 TACR3P29371 465 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 FOXL2P58012 376 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 HSF1Q00613 529 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 DMWDQ09019 674 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 DCTN1Q14203 1278 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 PFKFB3Q16875 520 aaPredicted RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 CC2D1BQ5T0F9 858 aaKnown RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 PRAMEF17Q5VTA0 474 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 ANKRD40Q6AI12 368 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 FBXO42Q6P3S6 717 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 CYP26C1Q6V0L0 522 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 RANBP10Q6VN20 620 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 KYAT3Q6YP21 454 aaKnown RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 C2CD5Q86YS7 1000 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 UEVLDQ8IX04 471 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 FTSJ3Q8IY81 847 aaKnown RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 C16orf71Q8IYS4 520 aaPredicted RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 TMEM57Q8N5G2 664 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 ENDOVQ8N8Q3 282 aaKnown RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 FSIP1Q8NA03 581 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 BCAS4Q8TDM0 211 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 PNISRQ8TF01 805 aaKnown RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 USP13Q92995 863 aaPredicted RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 ZNF764Q96H86 408 aaPredicted RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 PRR11Q96HE9 360 aaPredicted RBP3.43□□□□□ -1.86
SKP1-203ENST00000517625 TBATAQ96M53 351 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 ELOVL1Q9BW60 279 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 NUAK2Q9H093 628 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 ABHD16BQ9H3Z7 469 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 PRDM13Q9H4Q3 707 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 SFXN1Q9H9B4 322 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 PRDM16Q9HAZ2 1276 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 NOD2Q9HC29 1040 aa3.43□□□□□ -1.86
SKP1-203ENST00000517625 TRPC5Q9UL62 973 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms