RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TMPRSS15P98073 1019 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CREB5Q02930 508 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 GBE1Q04446 702 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RELQ04864 619 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SP140Q13342 867 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TRPC3Q13507 836 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 LAPTM5Q13571 262 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SELPLGQ14242 412 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SEMA3AQ14563 771 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 EFTUD2Q15029 972 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 LETM2Q2VYF4 491 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ADCK5Q3MIX3 580 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM153CQ494X1 144 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 OVOS1Q6IE37 1185 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ANGPTL8Q6UXH0 198 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RGS9BPQ6ZS82 235 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 C15orf52Q6ZUT6 534 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TRMT10CQ7L0Y3 403 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CYB5R4Q7L1T6 521 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 LIMS2Q7Z4I7 341 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMC3Q7Z5M5 1100 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 AKAP14Q86UN6 197 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 STK32CQ86UX6 486 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 LRRC6Q86X45 466 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 PDSS2Q86YH6 399 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMPRSS6Q8IU80 811 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 NOSTRINQ8IVI9 506 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 UNC45BQ8IWX7 931 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCAIMQ8N3R3 496 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 FBXL16Q8N461 479 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC17A8Q8NDX2 589 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SUPT20HQ8NEM7 779 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZFP28Q8NHY6 868 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLC22A8Q8TCC7 542 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ACTRT1Q8TDG2 376 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ADAMTS16Q8TE57 1224 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CASKIN2Q8WXE0 1202 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 S100ZQ8WXG8 99 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SEC14L1Q92503 715 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MTBPQ96DY7 904 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 EDC3Q96F86 508 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CNDP2Q96KP4 475 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 EGLN2Q96KS0 407 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ART5Q96L15 291 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MED15Q96RN5 788 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RMDN3Q96TC7 470 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MNTQ99583 582 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 DSCC1Q9BVC3 393 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RNF32Q9H0A6 362 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZMYND12Q9H0C1 365 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RBM38Q9H0Z9 239 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 OR51B5Q9H339 312 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 HIPK3Q9H422 1215 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SLA2Q9H6Q3 261 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 PPCSQ9HAB8 311 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 CYP4F11Q9HBI6 524 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RIC8AQ9NPQ8 531 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RBM12Q9NTZ6 932 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 SYBUQ9NX95 663 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TMEM9Q9P0T7 183 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 TBC1D14Q9P2M4 693 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM153AQ9UHL3 310 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RAPGEFL1Q9UHV5 662 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MOSPD1Q9UJG1 213 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 PTBP2Q9UKA9 531 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 MAN1B1Q9UKM7 699 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ERGIC3Q9Y282 383 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 RBM8AQ9Y5S9 174 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 KIAA1210Q9ULL0 1709 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ABCC6O95255 1503 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ARHGEF40Q8TER5 1519 aa4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZC3H13Q5T200 1668 aaKnown RBP4.96□□□□□ -1.62
HMGB1P19-201ENST00000517578 OR5K3A6NET4 321 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 SMCO2A6NFE2 343 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TCAF2A6NFQ2 919 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPY2A6NKD2 308 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 PODXLO00592 558 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ENPP3O14638 875 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 IRS4O14654 1257 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZNF185O15231 689 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZW10O43264 779 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ASNA1O43681 348 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 NUAK1O60285 661 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 RANBP6O60518 1105 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 EXOC3O60645 756 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 EPN2O95208 641 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ATE1O95260 518 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZBTB11O95625 1053 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 BMP15O95972 392 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TFAP2AP05549 437 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 ZGLP1P0C6A0 271 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 FAM58BPP0C7Q3 252 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPY3P0CV98 308 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 TSPY8P0CW00 308 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 RBP3P10745 1247 aa4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 MTHFD1P11586 935 aaKnown RBP4.95□□□□□ -1.62
HMGB1P19-201ENST00000517578 PDE6AP16499 860 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms