RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 ARHGEF4Q9NR80 690 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ARHGEF38Q9NXL2 777 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 CLIC5Q9NZA1 410 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 NINJ2Q9NZG7 142 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 DTLQ9NZJ0 730 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.56□□□□□ -0.72
SNF8-214ENST00000515174 BACE2Q9Y5Z0 518 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 MYO9BQ13459 2157 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 NCOR1O75376 2440 aa10.56□□□□□ -0.72
SNF8-214ENST00000515174 E7EVH7 732 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 F8W810 466 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 RASGRF2O14827 1237 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 RTN3O95197 1032 aaPredicted RBP10.55□□□□□ -0.72
SNF8-214ENST00000515174 ACRP10323 421 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 AMPD1P23109 780 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 GRIK1P39086 918 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 VPS41P49754 854 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 SLC5A3P53794 718 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 ARL4CP56559 192 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 YWHAGP61981 247 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNF8-214ENST00000515174 PITX1P78337 314 aaPredicted RBP10.55□□□□□ -0.72
SNF8-214ENST00000515174 DEFB103AP81534 67 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 KCNJ11Q14654 390 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 PPP2R5DQ14738 602 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 KRT71Q3SY84 523 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 CTXN3Q4LDR2 81 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 SLC39A12Q504Y0 691 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 TMEM240Q5SV17 173 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 PSRC1Q6PGN9 363 aaPredicted RBP10.55□□□□□ -0.72
SNF8-214ENST00000515174 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 NPNTQ6UXI9 565 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNF8-214ENST00000515174 RFX8Q6ZV50 586 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 CNPY4Q8N129 248 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 DQX1Q8TE96 717 aaKnown RBP10.55□□□□□ -0.72
SNF8-214ENST00000515174 LRRC39Q96DD0 335 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 C1orf74Q96LT6 269 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 NECAB3Q96P71 396 aaPredicted RBP10.55□□□□□ -0.72
SNF8-214ENST00000515174 GPR62Q9BZJ7 368 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 NKX2-4Q9H2Z4 354 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 SLC28A3Q9HAS3 691 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 DDIT4Q9NX09 232 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
SNF8-214ENST00000515174 FNIP2Q9P278 1114 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 HCSTQ9UBK5 93 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 LGALS13Q9UHV8 139 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 PRG3Q9Y2Y8 225 aaPredicted RBP10.55□□□□□ -0.72
SNF8-214ENST00000515174 HCN4Q9Y3Q4 1203 aa10.55□□□□□ -0.72
SNF8-214ENST00000515174 LAMA2P24043 3122 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 A0A087WUV0 522 aaPredicted RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 EEF2KO00418 725 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 IRAK2O43187 625 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 MTSS1O43312 755 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 SHBGP04278 402 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 IVLP07476 585 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 SLC2A3P11169 496 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 GOT1P17174 413 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 TPSB2P20231 275 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 NR1D1P20393 614 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 MX2P20592 715 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 RBL1P28749 1068 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 ATP5DP30049 168 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 HOXC13P31276 330 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 FDFT1P37268 417 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 RPL10AP62906 217 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 GBE1Q04446 702 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 ADGRE1Q14246 886 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 PRKD1Q15139 912 aaPredicted RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 TPSAB1Q15661 275 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 HIF1AQ16665 826 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 KYNUQ16719 465 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 AAK1Q2M2I8 961 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 BTBD8Q5XKL5 378 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 SLC8B1Q6J4K2 584 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 KCNT2Q6UVM3 1135 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 SCD5Q86SK9 330 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 ZC3H18Q86VM9 953 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 CCDC25Q86WR0 208 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 LRRC49Q8IUZ0 686 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 PDIK1LQ8N165 341 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 LZTR1Q8N653 840 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 OR2W6PQ8NHA6 318 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 TFB1MQ8WVM0 346 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 CENPTQ96BT3 561 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 ZNF689Q96CS4 500 aaPredicted RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 EPAS1Q99814 870 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 TTPALQ9BTX7 342 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 CNOT10Q9H9A5 744 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 OLA1Q9NTK5 396 aaKnown RBP10.54□□□□□ -0.72
SNF8-214ENST00000515174 MAFFQ9ULX9 164 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 HEY1Q9Y5J3 304 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 ACTL7BQ9Y614 415 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
SNF8-214ENST00000515174 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 TBKBP1A7MCY6 615 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 WASH4PA8MWX3 477 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 KCNU1A8MYU2 1149 aa10.53□□□□□ -0.72
SNF8-214ENST00000515174 I6L893 689 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms