RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 CORO1AP31146 461 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 L1CAMP32004 1257 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 GBP2P32456 591 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 HCAR3P49019 387 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 PEX5P50542 639 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 ARSEP51690 589 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 MLLT6P55198 1093 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 TAS2R40P59535 323 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 FCHO2Q0JRZ9 810 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 SEMA3BQ13214 749 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 HTR4Q13639 388 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 DPYSL2Q16555 572 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 EFHC2Q5JST6 749 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 ARTNQ5T4W7 220 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 ADGRF1Q5T601 910 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 PEX26Q7Z412 305 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 MFSD6LQ8IWD5 586 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 KATNAL2Q8IYT4 538 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 CCDC185Q8N715 623 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 TDRD5Q8NAT2 981 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 BPIFB1Q8TDL5 484 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 RNF34Q969K3 372 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 PRMT1Q99873 361 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 SNRNP25Q9BV90 132 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 GOLPH3Q9H4A6 298 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 EPHX3Q9H6B9 360 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 ANLNQ9NQW6 1124 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 SMPD4Q9NXE4 827 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 RCOR3Q9P2K3 495 aaPredicted RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 AGO1Q9UL18 857 aaKnown RBP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 SH3BP1Q9Y3L3 701 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 JRKLQ9Y4A0 524 aa12.41□□□□□ -0.42
PDLIM5-220ENST00000514830 IGLV3-10A0A075B6K4 115 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 SYNJ2BP-COX16A0A087WUM0 186 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 TMEM110-MUSTN1A8MSY1 372 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 LOC730098B7Z3J9 87 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 PAGE1O75459 146 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 RARAP10276 462 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 HOXC13P31276 330 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 CHKAP35790 457 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 ETF1P62495 437 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 PDK2Q15119 407 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 FAM133BQ5BKY9 247 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 MS4A13Q5J8X5 152 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 ZNF569Q5MCW4 686 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 PIK3R6Q5UE93 754 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 MANEALQ5VSG8 457 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 RNF43Q68DV7 783 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 CPNE8Q86YQ8 564 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 ZNF683Q8IZ20 524 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 UBL4BQ8N7F7 174 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 RIN3Q8TB24 985 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 WBP2Q969T9 261 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 RSPRY1Q96DX4 576 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 LRRC3BQ96PB8 259 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 SMG9Q9H0W8 520 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 PRDM16Q9HAZ2 1276 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 COX16Q9P0S2 106 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 IGSF9Q9P2J2 1179 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 PCSK1NQ9UHG2 260 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 AP4E1Q9UPM8 1137 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 HS3ST4Q9Y661 456 aa12.4□□□□□ -0.42
PDLIM5-220ENST00000514830 KIAA1549LQ6ZVL6 1849 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 HEPACAM2A8MVW5 462 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 C2CD4DB7Z1M9 353 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 KIF2AO00139 706 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 DDX3YO15523 660 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 FTCDO95954 541 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 HMBSP08397 361 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 PTPN7P35236 360 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 VIPR2P41587 438 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 COPS2P61201 443 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 TAZQ16635 292 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 MPP7Q5T2T1 576 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 TTC39BQ5VTQ0 682 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 TXNRD3NBQ6F5E7 133 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 NADSYN1Q6IA69 706 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 VITQ6UXI7 678 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 MAP7D3Q8IWC1 876 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 SLC35F6Q8N357 371 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 C17orf53Q8N3J3 647 aaPredicted RBP12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 EXD1Q8NHP7 514 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 TSC1Q92574 1164 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 FAM83CQ9BQN1 747 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 TLR10Q9BXR5 811 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 THG1LQ9NWX6 298 aaKnown RBP12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 MARK1Q9P0L2 795 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 OR12D3Q9UGF7 316 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 MUC6Q6W4X9 2439 aa12.39□□□□□ -0.43
PDLIM5-220ENST00000514830 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 MYO10Q9HD67 2058 aa12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 C3orf70A6NLC5 250 aaPredicted RBP12.38□□□□□ -0.43
PDLIM5-220ENST00000514830 DRGXA6NNA5 263 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms