RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FBXL13Q8NEE6 735 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 NSUN6Q8TEA1 469 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PYROXD1Q8WU10 500 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 CYP26B1Q9NR63 512 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SAMD15Q9P1V8 674 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PCNTO95613 3336 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SYNGAP1Q96PV0 1343 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SPATA31C2B4DYI2 1134 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 DGAT1O75907 488 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 BAG2O95816 211 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 RETP07949 1114 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 KRT7P08729 469 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SCNN1AP37088 669 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 MFAP3P55082 362 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 CDR2Q01850 454 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ENPEPQ07075 957 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 DNAJC3Q13217 504 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ITIH4Q14624 930 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TMEM63BQ5T3F8 832 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ANGEL2Q5VTE6 544 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ZDHHC24Q6UX98 284 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 AKAP14Q86UN6 197 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 GPD1LQ8N335 351 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PRELID2Q8N945 189 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TRPM4Q8TD43 1214 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 KLRG1Q96E93 195 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 FAR2Q96K12 515 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SDHAF3Q9NRP4 125 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TBC1D14Q9P2M4 693 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 SLC9A2Q9UBY0 812 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 MALT1Q9UDY8 824 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 ANGPTL3Q9Y5C1 460 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 PPP2R3BQ9Y5P8 575 aa7.7□□□□□ -1.18
PDLIM5-219ENST00000514743 TCRBV7S2A1N4TA0A589 114 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 DCDC2CA8MYV0 355 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 MIF4GDA9UHW6 222 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SORBS3O60504 671 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 PSAPP07602 524 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 M6PRP20645 277 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 GARTP22102 1010 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 GTF2H1P32780 548 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 CTNNA1P35221 906 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 DAB2P98082 770 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 DCAF15Q66K64 600 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 RALGPS2Q86X27 583 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF565Q8N9K5 539 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 LRRC8CQ8TDW0 803 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 HSPH1Q92598 858 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 GLG1Q92896 1179 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 C18orf8Q96DM3 657 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 OMA1Q96E52 524 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 TSEN34Q9BSV6 310 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 PI4K2AQ9BTU6 479 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SEPT9Q9UHD8 586 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 MCM3APO60318 1980 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 CCRL2O00421 344 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 NCAM2O15394 837 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 PEX10O60683 326 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 GABBR2O75899 941 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SNRPAP09012 282 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 UNGP13051 313 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 HADHAP40939 763 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SLCO1A2P46721 670 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 COPS2P61201 443 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 NOP14P78316 857 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SQLEQ14534 574 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 RFTN1Q14699 578 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 C16orf72Q14CZ0 275 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 RAPH1Q70E73 1250 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 LRRC71Q8N4P6 559 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 ZNF564Q8TBZ8 553 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 POMGNT1Q8WZA1 660 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 CHMP6Q96FZ7 201 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 POLR3FQ9H1D9 316 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 ACAD9Q9H845 621 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SLC35C2Q9NQQ7 365 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 AVENQ9NQS1 362 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 ARHGEF3Q9NR81 526 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 GRHL1Q9NZI5 618 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 FNIP2Q9P278 1114 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 AGO2Q9UKV8 859 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 AFG3L2Q9Y4W6 797 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 MAFBQ9Y5Q3 323 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 SNX8Q9Y5X2 465 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 STYXL1Q9Y6J8 313 aa7.69□□□□□ -1.18
PDLIM5-219ENST00000514743 PASKQ96RG2 1323 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 HNRNPDLO14979 420 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 KIAA0391O15091 583 aaKnown RBP7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 PHF2O75151 1096 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 OR6B1O95007 311 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 GSTM1P09488 218 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 SUPT20HL2P0C7V6 817 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 OSBPP22059 807 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 LRPAP1P30533 357 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 P2RX3P56373 397 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 PRAMEP78395 509 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 SP4Q02446 784 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 GCNT1Q02742 428 aa7.68□□□□□ -1.18
PDLIM5-219ENST00000514743 SMAD4Q13485 552 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms