RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 OR2T34Q8NGX1 318 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 JPH3Q8WXH2 748 aaPredicted RBP8.03□□□□□ -1.12
CLDND1-229ENST00000513988 SPATA17Q96L03 361 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 HSD17B14Q9BPX1 270 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 DUSP23Q9BVJ7 150 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 SLC29A3Q9BZD2 475 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 CIPCQ9C0C6 399 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 FBRSQ9HAH7 460 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 PREBQ9HCU5 417 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 NCKIPSDQ9NZQ3 722 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 GTF3C4Q9UKN8 822 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 SLC27A6Q9Y2P4 619 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 MAP4K5Q9Y4K4 846 aa8.03□□□□□ -1.12
CLDND1-229ENST00000513988 DIDO1Q9BTC0 2240 aaKnown RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 NEMP2A6NFY4 417 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 TCP11X1B4DZS4 312 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 TMX2-CTNND1H3BSU7 103 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 K7ESM1 405 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ST8SIA5O15466 376 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 COCHO43405 550 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 CLTAP09496 248 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 CD1EP15812 388 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ANXA13P27216 316 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 CD82P27701 267 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 CDC27P30260 824 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 MAGEA11P43364 429 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 MFAP3P55082 362 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 FGL2Q14314 439 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ENOX2Q16206 610 aaKnown RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 INTS6LQ5JSJ4 861 aaKnown RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 SPATA1Q5VX52 437 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ZNF776Q68DI1 518 aaPredicted RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 USP30Q70CQ3 517 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 TMPRSS9Q7Z410 1059 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 SORCS1Q8WY21 1168 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 GOLGA1Q92805 767 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 HAS1Q92839 578 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 FUBP3Q96I24 572 aaKnown RBP eCLIP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ZBTB45Q96K62 511 aaPredicted RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 SLITRK1Q96PX8 696 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 TTLL2Q9BWV7 592 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ELOVL2Q9NXB9 296 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 FBXL12Q9NXK8 326 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 PLK2Q9NYY3 685 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 FOXJ2Q9P0K8 574 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 VPS54Q9P1Q0 977 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 MN1Q10571 1320 aaPredicted RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 MAP1AP78559 2803 aaPredicted RBP8.02□□□□□ -1.13
CLDND1-229ENST00000513988 SCN1AP35498 2009 aa8.02□□□□□ -1.13
CLDND1-229ENST00000513988 ACANP16112 2415 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 SCN8AQ9UQD0 1980 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 ZNF106Q9H2Y7 1883 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 TMEM200CA6NKL6 621 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 CCDC169A6NNP5 214 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 LACTBL1A8MY62 500 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 MKRN2OSH3BPM6 223 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 K7EM74 188 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 PIRO00625 290 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 PIAS2O75928 621 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 PRKAR1AP10644 381 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 CD99P14209 185 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 CYP11B2P19099 503 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 ACAT1P24752 427 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 MATR3P43243 847 aaKnown RBP eCLIP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 TAF6P49848 677 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 HDAC4P56524 1084 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 AKAP17AQ02040 695 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 TAF10Q12962 218 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 EIF4HQ15056 248 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 CCDC142Q17RM4 750 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 FNDC3BQ53EP0 1204 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 NUGGCQ68CJ6 796 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 TCTN3Q6NUS6 607 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 ZCCHC8Q6NZY4 707 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 ANKS1BQ7Z6G8 1248 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 B3GNT8Q7Z7M8 397 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 IL22RA1Q8N6P7 574 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 ZNF366Q8N895 744 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 WBP2Q969T9 261 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 CEP295NLQ96MC4 621 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 TSPAN18Q96SJ8 248 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 ACBD6Q9BR61 282 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 POLD4Q9HCU8 107 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 DDX43Q9NXZ2 648 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 FBXO10Q9UK96 956 aa8.01□□□□□ -1.13
CLDND1-229ENST00000513988 TPX2Q9ULW0 747 aaKnown RBP8.01□□□□□ -1.13
CLDND1-229ENST00000513988 PKDREJQ9NTG1 2253 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 EME2A4GXA9 379 aaPredicted RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 ARHGEF35A5YM69 484 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 PRSS44E7EML9 344 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 STMND1H3BQB6 276 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 SCAMP1O15126 338 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 TOM1L1O75674 476 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 NEBLO76041 1014 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 BAG4O95429 457 aaKnown RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 LIFP15018 202 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 GCFC2P16383 781 aaKnown RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 ITIH1P19827 911 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 STAT4Q14765 748 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 BMT2Q1RMZ1 405 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms