RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ARHGEF38Q9NXL2 777 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 HCSTQ9UBK5 93 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 SCML2Q9UQR0 700 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 TEX264Q9Y6I9 313 aa15.43■□□□□ 0.06
VCAN-211ENST00000513984 METTL18O95568 372 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 GALTP07902 379 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 ATN1P54259 1190 aaPredicted RBP15.42■□□□□ 0.06
VCAN-211ENST00000513984 IFRD2Q12894 506 aaPredicted RBP15.42■□□□□ 0.06
VCAN-211ENST00000513984 SEMA5AQ13591 1074 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 BRMS1LQ5PSV4 323 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 FAXCQ5TGI0 409 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 CYP4X1Q8N118 509 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 BCAS4Q8TDM0 211 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 SELENOSQ9BQE4 189 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 FERMT1Q9BQL6 677 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 OSBPL2Q9H1P3 480 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 PRDM12Q9H4Q4 367 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 OR12D3Q9UGF7 316 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 SLC24A2Q9UI40 661 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 RABGEF1Q9UJ41 708 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 ACTL7BQ9Y614 415 aa15.42■□□□□ 0.06
VCAN-211ENST00000513984 TBKBP1A7MCY6 615 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 NCAM2O15394 837 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 TBC1D4O60343 1298 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 OPHN1O60890 802 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 APRTP07741 180 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 CHN1P15882 459 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 SSTR1P30872 391 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 FDFT1P37268 417 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 PGFP49763 221 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 CCL23P55773 120 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 ANKRD20A2Q5SQ80 823 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 FAM182AQ5T1J6 154 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 ANKRD20A1Q5TYW2 823 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 C1orf53Q5VUE5 145 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 ANKRD20A3Q5VUR7 823 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 CAPN12Q6ZSI9 719 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 ARHGEF18Q6ZSZ5 1173 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 TADA2BQ86TJ2 420 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 CEP57Q86XR8 500 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 LRRC43Q8N309 656 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 MDM1Q8TC05 714 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 MAML1Q92585 1016 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 P2RY11Q96G91 374 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 CRISPLD2Q9H0B8 497 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 FBXO44Q9H4M3 255 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 ACSS3Q9H6R3 686 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 NMUR1Q9HB89 426 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 TMEM51Q9NW97 253 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 IL37Q9NZH6 218 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 CHMP2BQ9UQN3 213 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 COL4A6Q14031 1691 aa15.41■□□□□ 0.06
VCAN-211ENST00000513984 A0A1W2PQH9 124 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 SPAG6O75602 509 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 STK10O94804 968 aaKnown RBP15.4■□□□□ 0.06
VCAN-211ENST00000513984 LRIG2O94898 1065 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 ATP2A2P16615 1042 aaKnown RBP15.4■□□□□ 0.06
VCAN-211ENST00000513984 ELK3P41970 407 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 MAGEA3P43357 314 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 AP1B1Q10567 949 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 SMARCB1Q12824 385 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 NR1H3Q13133 447 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 SYCP2LQ5T4T6 812 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 C3orf62Q6ZUJ4 267 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 CAND1Q86VP6 1230 aaKnown RBP15.4■□□□□ 0.06
VCAN-211ENST00000513984 MON1AQ86VX9 555 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 PALM2Q8IXS6 379 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 RNF34Q969K3 372 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 HAPLN3Q96S86 360 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 PPP1R12CQ9BZL4 782 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 FAM92AA1XBS5 289 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 RNF103O00237 685 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 HTR7P34969 479 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 SERPINB6P35237 376 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 GPR15P49685 360 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 TLE2Q04725 743 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 GPR17Q13304 367 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 PPP2R5DQ14738 602 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 TMED2Q15363 201 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 DDR2Q16832 855 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 KLHL38Q2WGJ6 581 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 MSANTD2Q6P1R3 559 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 ZNF534Q76KX8 674 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 IGDCC3Q8IVU1 814 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 AGGF1Q8N302 714 aaeCLIP15.4■□□□□ 0.06
VCAN-211ENST00000513984 ARHGAP18Q8N392 663 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 NPWQ8N729 165 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 SPPL2BQ8TCT7 592 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 ATXN2LQ8WWM7 1075 aaKnown RBP15.4■□□□□ 0.06
VCAN-211ENST00000513984 CASP10Q92851 521 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 LRRC39Q96DD0 335 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 B3GALT6Q96L58 329 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 PGLYRP2Q96PD5 576 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 XPO6Q96QU8 1125 aaKnown RBP15.4■□□□□ 0.06
VCAN-211ENST00000513984 OXCT2Q9BYC2 517 aaPredicted RBP15.4■□□□□ 0.06
VCAN-211ENST00000513984 BRD8Q9H0E9 1235 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 TBK1Q9UHD2 729 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms