RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, human

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOBTB3-213	ENST00000512878	ATXN2	Q99700	1313 aa	Known RBP	13.32	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TM4SF5	O14894	197 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SART1	O43290	800 aa	Known RBP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ACSL4	O60488	711 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CAVIN2	O95810	425 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	EEF1G	P26641	437 aa	Known RBP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PITX1	P78337	314 aa	Predicted RBP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	EIF4H	Q15056	248 aa	Known RBP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PPM1J	Q5JR12	505 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	STPG1	Q5TH74	334 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	KLHDC7A	Q5VTJ3	777 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CDKAL1	Q5VV42	579 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TAC4	Q86UU9	113 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PASD1	Q8IV76	773 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	UNC45B	Q8IWX7	931 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ADAM32	Q8TC27	787 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	GOLGA1	Q92805	767 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TMA16	Q96EY4	203 aa	Known RBP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	MRGPRX1	Q96LB2	322 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PRICKLE1	Q96MT3	831 aa	Predicted RBP	13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SERPINB11	Q96P15	392 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	GBP4	Q96PP9	640 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	POPDC2	Q9HBU9	364 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	FSCN3	Q9NQT6	498 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	VPS45	Q9NRW7	570 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TMEM74B	Q9NUR3	256 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ELOVL2	Q9NXB9	296 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	FHOD1	Q9Y613	1164 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	STON1	Q9Y6Q2	735 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CHD8	Q9HCK8	2581 aa		13.31	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	LNP1	A1A4G5	178 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	NPC1	O15118	1278 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	IRAK2	O43187	625 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	FOXD2	O60548	495 aa	Predicted RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SDHB	P21912	280 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SLC11A2	P49281	568 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	LIMK1	P53667	647 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	YWHAZ	P63104	245 aa	Known RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PTK2	Q05397	1052 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ZNF234	Q14588	700 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	DRAP1	Q14919	205 aa	Predicted RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	FUT11	Q495W5	492 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PTPN20	Q4JDL3	420 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	MPP7	Q5T2T1	576 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SDE2	Q6IQ49	451 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CYP2U1	Q7Z449	544 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ADIPOR2	Q86V24	386 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	C1orf131	Q8NDD1	294 aa	Known RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PIGK	Q92643	395 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PPP1R13B	Q96KQ4	1090 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	LMLN	Q96KR4	655 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SPACA7	Q96KW9	195 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	IRX2	Q9BZI1	471 aa	Predicted RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	MKRN2	Q9H000	416 aa	Known RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	NUCKS1	Q9H1E3	243 aa	Known RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	XPO7	Q9UIA9	1087 aa	Known RBP	13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ACACB	O00763	2458 aa		13.3	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PLXNA2	O75051	1894 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TRUB2	O95900	331 aa	Known RBP	13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ERBB2	P04626	1255 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	UCHL3	P15374	230 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PRKCH	P24723	683 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CDH5	P33151	784 aa	Predicted RBP	13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	COPA	P53621	1224 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	IRX4	P78413	519 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	KRT31	Q15323	416 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PTPRN	Q16849	979 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SPDYC	Q5MJ68	293 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	OLFML1	Q6UWY5	402 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	FAM183BP	Q6ZVS7	135 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	DDX1	Q92499	740 aa	Known RBP	13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	SLC2A13	Q96QE2	648 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	EDEM2	Q9BV94	578 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PLCB1	Q9NQ66	1216 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ABCB8	Q9NUT2	735 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TAB2	Q9NYJ8	693 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CYP8B1	Q9UNU6	501 aa		13.29	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	C4orf47	A7E2U8	309 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CAPN9	O14815	690 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	MAP3K13	O43283	966 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TIMM44	O43615	452 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	TBL1X	O60907	577 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	GLI1	P08151	1106 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	C7	P10643	843 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CYP11B1	P15538	503 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ITPKA	P23677	461 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CD70	P32970	193 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	KLK7	P49862	253 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	RPS24	P62847	133 aa	Known RBP	13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	BYSL	Q13895	437 aa	Known RBP	13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	RAPGEF1	Q13905	1077 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	DCAF6	Q58WW2	860 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	MS4A13	Q5J8X5	152 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	LPCAT2	Q7L5N7	544 aa		13.28	□□□□□ -0.28
RHOBTB3-213	ENST00000512878	CACUL1	Q86Y37	369 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms