RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 ARF3P61204 181 aaPredicted RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 ARF1P84077 181 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 CASP12Q6UXS9 341 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 MSANTD1Q6ZTZ1 278 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 UBE2J2Q8N2K1 259 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 FAM151AQ8WW52 585 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 GAD1Q99259 594 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 MXD3Q9BW11 206 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 NUSAP1Q9BXS6 441 aaKnown RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 CLEC4MQ9H2X3 399 aaPredicted RBP9.14□□□□□ -0.95
VCAN-208ENST00000512590 ADPRHL2Q9NX46 363 aa9.14□□□□□ -0.95
VCAN-208ENST00000512590 ZNF682O95780 498 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ZNF286BP0CG31 522 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 HPCAL1P37235 193 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 WASP42768 502 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 GPD2P43304 727 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 EXOSC10Q01780 885 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 PTSQ03393 145 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 RUNX2Q13950 521 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CLCA4Q14CN2 919 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 IRGCQ6NXR0 463 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 TTI2Q6NXR4 508 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 METTL3Q86U44 580 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 SLC4A11Q8NBS3 891 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 GMCL1P1Q8NEA9 526 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 GFM2Q969S9 779 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 TMEM68Q96MH6 324 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 SIKE1Q9BRV8 207 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 TMEM39BQ9GZU3 492 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 RNPEPQ9H4A4 650 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 NT5MQ9NPB1 228 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 DNAJC16Q9Y2G8 782 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 SNCAIPQ9Y6H5 919 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 WRBO00258 174 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 TM9SF1O15321 606 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ZBTB14O43829 449 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CSTBP04080 98 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 PDHA2P29803 388 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 NT5C2P49902 561 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 SNRPD1P62314 119 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 DLG1Q12959 904 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CBWD6Q4V339 395 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ALKBH5Q6P6C2 394 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 SNX20Q7Z614 316 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 MICU2Q8IYU8 434 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 OR14C36Q8NHC7 312 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ZNF333Q96JL9 665 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 KCTD10Q9H3F6 313 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 DPEP2Q9H4A9 486 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 THAP9Q9H5L6 903 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.13□□□□□ -0.95
VCAN-208ENST00000512590 CYP2D6P10635 497 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CCKBRP32239 447 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 MAPK10P53779 464 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 AGAP9Q5VTM2 703 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 EXOC3L1Q86VI1 746 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ZNF671Q8TAW3 534 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 DNAJB3Q8WWF6 145 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CRAMP1Q96RY5 1269 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 PI4K2AQ9BTU6 479 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CENPXA8MT69 81 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ENTPD3O75355 529 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 BPNT1O95861 308 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 KLK3P07288 261 aaPredicted RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 CYP2C8P10632 490 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 PSMD8P48556 350 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 POLE2P56282 527 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ATG9AQ7Z3C6 839 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 SLC13A5Q86YT5 568 aaPredicted RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 ZNF527Q8NB42 609 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 TTLL11Q8NHH1 800 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 RAD54LQ92698 747 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CPB2Q96IY4 423 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 TBATAQ96M53 351 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 PRICKLE1Q96MT3 831 aaPredicted RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 RAD21L1Q9H4I0 556 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 LMBRD1Q9NUN5 540 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 KIF24Q5T7B8 1368 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 CD3EAPO15446 510 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 RNASEH2AO75792 299 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 TRAPPC6AO75865 159 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 HAUS5O94927 633 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 FBXO21O94952 628 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 IL33O95760 270 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 F9P00740 461 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 OAS2P29728 719 aaKnown RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 ARSEP51690 589 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ACTR3P61158 418 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 NFKB2Q00653 900 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 MAGEE2Q8TD90 523 aaPredicted RBP9.13□□□□□ -0.95
VCAN-208ENST00000512590 FAM136AQ96C01 138 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 ATG4CQ96DT6 458 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 MTMR9Q96QG7 549 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 PANX3Q96QZ0 392 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 HIPK3Q9H422 1215 aa9.13□□□□□ -0.95
VCAN-208ENST00000512590 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms