RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CCDC78A2IDD5 438 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRAMEF26H0Y7S4 382 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA8MH3BSY2 632 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA8RI6L899 631 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRAF5O00463 557 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 LIN7AO14910 233 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRPF4O43172 522 aaKnown RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMAD6O43541 496 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DNAJA2O60884 412 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SMIM24O75264 130 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CDK14O94921 469 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEMA3DO95025 777 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RTN3O95197 1032 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 F2P00734 622 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MPOP05164 745 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ITGB1P05556 798 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CES1P23141 567 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALML3P27482 149 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TYK2P29597 1187 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SSRP1Q08945 709 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCNJ11Q14654 390 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 USP10Q14694 798 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 POSTNQ15063 836 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZSCAN26Q16670 478 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PARP6Q2NL67 630 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM83BQ5T0W9 1011 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPOUT1Q5T280 376 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 OGFRL1Q5TC84 451 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ASPHD2Q6ICH7 369 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NAPRTQ6XQN6 538 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PDZD4Q76G19 769 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRABD2AQ86V40 505 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CNGA4Q8IV77 575 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TFB1MQ8WVM0 346 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRCCQ92733 491 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPKOWQ92917 476 aaPredicted RBP eCLIP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC17Q96AE7 1141 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GLIS2Q9BZE0 524 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C11orf49Q9H6J7 331 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ELAC1Q9H777 363 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLCO1B3Q9NPD5 702 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DIABLOQ9NR28 239 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 EVA1BQ9NVM1 165 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 UTP6Q9NYH9 597 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FNIP2Q9P278 1114 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 LRP2BPQ9P2M1 347 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NDOR1Q9UHB4 597 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NFU1Q9UMS0 254 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF407Q9C0G0 2248 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DDTLA6NHG4 134 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPDYE16A6NNV3 312 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 E7ENX8 843 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 H0YC42 278 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 J3QRE1 110 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 M0R3G1 203 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPP6CO00743 305 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GFAPP14136 432 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TFE3P19532 575 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ALDH5A1P51649 535 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYL5Q02045 173 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SEMA5AQ13591 1074 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC18A3Q16572 532 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MEP1AQ16819 746 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KNOP1Q1ED39 458 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC4A8Q2Y0W8 1093 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC9C1Q4G0N8 1177 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRB2Q5IJ48 1285 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF484Q5JVG2 852 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 THEMIS2Q5TEJ8 643 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF658Q5TYW1 1059 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PLPP4Q5VZY2 271 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 MCTP2Q6DN12 878 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF530Q6P9A1 599 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C11orf88Q6PI97 169 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 DTHD1Q6ZMT9 781 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RETREG3Q86VR2 466 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIOX2Q8IUF8 465 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TP53INP2Q8IXH6 220 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIMKLAQ8IXN7 391 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GUF1Q8N442 669 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CPA6Q8N4T0 437 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 KCTD17Q8N5Z5 321 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 OR9Q1Q8NGQ5 310 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 C1orf216Q8TAB5 229 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 CALR3Q96L12 384 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SIGLEC10Q96LC7 697 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PRPF18Q99633 342 aaKnown RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 GINS4Q9BRT9 223 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM126AQ9BYI3 521 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC7A5P2Q9GIP4 190 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM204AQ9H8W3 233 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 ACTR5Q9H9F9 607 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 LTB4R2Q9NPC1 389 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 NCKIPSDQ9NZQ3 722 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEFF2Q9UIK5 374 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 RABGEF1Q9UJ41 708 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 INTUQ9ULD6 942 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCDHGB3Q9Y5G1 929 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCDHGB1Q9Y5G3 927 aa1.72□□□□□ -2.13
TRAPPC13-211ENST00000512009 V9GY48 417 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms