RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 TMEM209Q96SK2 561 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 TBC1D17Q9HA65 648 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 ARFGAP3Q9NP61 516 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 GDF3Q9NR23 364 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 TMEM30AQ9NV96 361 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 RCOR3Q9P2K3 495 aaPredicted RBP10.82□□□□□ -0.68
HOXA4-203ENST00000511914 MTRRQ9UBK8 725 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 WNT16Q9UBV4 365 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 SCML2Q9UQR0 700 aa10.82□□□□□ -0.68
HOXA4-203ENST00000511914 UTP11Q9Y3A2 253 aaKnown RBP10.82□□□□□ -0.68
HOXA4-203ENST00000511914 FAM92AA1XBS5 289 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 RAD51CO43502 376 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 LMNAP02545 664 aaKnown RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 TCF4P15884 667 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 CYP2F1P24903 491 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 COILP38432 576 aaPredicted RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 TUFMP49411 452 aaKnown RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 CACNA2D1P54289 1103 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ATP11AP98196 1134 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DR1Q01658 176 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DSG1Q02413 1049 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 CREMQ03060 361 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DPYSL2Q16555 572 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 C15orf59Q2T9L4 293 aaPredicted RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ATP13A4Q4VNC1 1196 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DCAF6Q58WW2 860 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 AADACL2Q6P093 401 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 FBXO38Q6PIJ6 1188 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ELMSAN1Q6PJG2 1045 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 TMCO3Q6UWJ1 677 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 MFSD7Q6UXD7 560 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 BBS12Q6ZW61 710 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 BHLHA9Q7RTU4 235 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 MON1AQ86VX9 555 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 KLHL7Q8IXQ5 586 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 NUP93Q8N1F7 819 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ATL2Q8NHH9 583 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 CLEC4CQ8WTT0 213 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 NTAN1Q96AB6 310 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ZNF707Q96C28 371 aaPredicted RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 RMDN1Q96DB5 314 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 PNKPQ96T60 521 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DCLK3Q9C098 648 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DDX47Q9H0S4 455 aaKnown RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ABCC13Q9NSE7 274 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 ABI2Q9NYB9 513 aaPredicted RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DMGDHQ9UI17 866 aaKnown RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
HOXA4-203ENST00000511914 SSX2IPQ9Y2D8 614 aa10.81□□□□□ -0.68
HOXA4-203ENST00000511914 FRYLO94915 3013 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 FAM186AA6NE01 2351 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 GOLGA8CPA6NN73 597 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 YJEFN3A6XGL0 299 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 E7ENQ6 273 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 CAPN9O14815 690 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 TGM5O43548 720 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ZNF189O75820 626 aaPredicted RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 HEXIM1O94992 359 aaKnown RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 GAS8O95995 478 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 FYNP06241 537 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 USP17L7P0C7H9 530 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 HAPLN1P10915 354 aaPredicted RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 SRFP11831 508 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 CPB1P15086 417 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ZFXP17010 805 aaPredicted RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 RDXP35241 583 aaKnown RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 SLC5A3P53794 718 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 VSNL1P62760 191 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 SCAPQ12770 1279 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 NNTQ13423 1086 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 PSMD5Q16401 504 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 RTP2Q5QGT7 225 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 SH3PXD2AQ5TCZ1 1133 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 DAB2IPQ5VWQ8 1189 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 BSPRYQ5W0U4 402 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 TXNRD3NBQ6F5E7 133 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 CCDC137Q6PK04 289 aaKnown RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 SND1Q7KZF4 910 aaKnown RBP eCLIP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 GPRIN1Q7Z2K8 1008 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ZNF276Q8N554 614 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 DCLK2Q8N568 766 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 CCHCR1Q8TD31 782 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 FAF2Q96CS3 445 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ERP44Q9BS26 406 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ZNF670Q9BS34 389 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 RPP25Q9BUL9 199 aaKnown RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 MAK16Q9BXY0 300 aaKnown RBP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 FOXQ1Q9C009 403 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ZWILCHQ9H900 591 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 ARHGEF3Q9NR81 526 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.8□□□□□ -0.68
HOXA4-203ENST00000511914 FAM114A2Q9NRY5 505 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 FNIP2Q9P278 1114 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 EPS15L1Q9UBC2 864 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 PCSK1NQ9UHG2 260 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 AMACRQ9UHK6 382 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 DPP7Q9UHL4 492 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 SIT1Q9Y3P8 196 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 NUMBLQ9Y6R0 609 aa10.8□□□□□ -0.68
HOXA4-203ENST00000511914 PTPRZ1P23471 2315 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms