RNA–Protein interactions for RNA: ENST00000511241.5

LINC01088-207, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2

Gene LINC01088, Length 679 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-207ENST00000511241 SMPD4Q9NXE4 827 aa8.41□□□□□ -1.06
LINC01088-207ENST00000511241 TESMINQ9Y4I5 508 aa8.41□□□□□ -1.06
LINC01088-207ENST00000511241 DIRC3C9JPN6 131 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 E7EWF7 191 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 FRS3O43559 492 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 CYTH3O43739 400 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 MMP3P08254 477 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 ZNF286BP0CG31 522 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 GPNMBQ14956 572 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 SAFBQ15424 915 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC01088-207ENST00000511241 KHDC1LQ5JSQ8 128 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 ARHGEF16Q5VV41 709 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 TMCO2Q7Z6W1 182 aaPredicted RBP8.4□□□□□ -1.06
LINC01088-207ENST00000511241 PPP1R3BQ86XI6 285 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 RAB11FIP4Q86YS3 637 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 PJA1Q8NG27 643 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 PIGSQ96S52 555 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 DCLRE1CQ96SD1 692 aaKnown RBP8.4□□□□□ -1.06
LINC01088-207ENST00000511241 CDK5RAP1Q96SZ6 601 aaKnown RBP8.4□□□□□ -1.06
LINC01088-207ENST00000511241 ANP32EQ9BTT0 268 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 KRT23Q9C075 422 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 KLC2Q9H0B6 622 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 PXMP2Q9NR77 195 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
LINC01088-207ENST00000511241 LOC102724159A0A0B4J2E5 919 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 A0A1W2PPL8 197 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 EPOPA6NHQ4 379 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 IFIT3O14879 490 aaKnown RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 MATN4O95460 622 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 MYCLP12524 364 aaPredicted RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 ACRV1P26436 265 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 SLC6A4P31645 630 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 SCNN1GP51170 649 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 HSD17B4P51659 736 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 CHN2P52757 468 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 SP2Q02086 613 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 BECN1Q14457 450 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 GRM4Q14833 912 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 PWP2Q15269 919 aaKnown RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 COBLL1Q53SF7 1204 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 ZNF585AQ6P3V2 769 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 MED25Q71SY5 747 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 C11orf96Q7Z7L8 435 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 TNPO1Q92973 898 aaKnown RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 CERS4Q9HA82 394 aa8.39□□□□□ -1.07
LINC01088-207ENST00000511241 PIH1D1Q9NWS0 290 aaKnown RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 MRPL11Q9Y3B7 192 aaKnown RBP8.39□□□□□ -1.07
LINC01088-207ENST00000511241 KRTAP9-6A0A140TA67 174 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 CFAP69A5D8W1 941 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 MUSKO15146 869 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 MGEA5O60502 916 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 GH1P01241 217 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 IQCF3P0C7M6 154 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 RXRAP19793 462 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 TROAPQ12815 778 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 SEMA5AQ13591 1074 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 POLD3Q15054 466 aaPredicted RBP8.38□□□□□ -1.07
LINC01088-207ENST00000511241 STXBP2Q15833 593 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 PTGISQ16647 500 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 UTP14CQ5TAP6 766 aaKnown RBP8.38□□□□□ -1.07
LINC01088-207ENST00000511241 SYT12Q8IV01 421 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 MB21D2Q8IYB1 491 aaPredicted RBP8.38□□□□□ -1.07
LINC01088-207ENST00000511241 LRTOMTQ8WZ04 291 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 C8orf49Q96NF6 230 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 BHMT2Q9H2M3 363 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 ZMAT3Q9HA38 289 aaKnown RBP8.38□□□□□ -1.07
LINC01088-207ENST00000511241 RSAD1Q9HA92 442 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 HDAC6Q9UBN7 1215 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 PNMA2Q9UL42 364 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 PCDHA6Q9UN73 950 aa8.38□□□□□ -1.07
LINC01088-207ENST00000511241 SCN5AQ14524 2016 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 SCN10AQ9Y5Y9 1956 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 RAD50Q92878 1312 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 hCG_1642624A0A1W2PR95 340 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 ANO9A1A5B4 782 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 ZBTB5O15062 677 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 TRIM24O15164 1050 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 EIF3JO75822 258 aaKnown RBP8.37□□□□□ -1.07
LINC01088-207ENST00000511241 RECQL4O94761 1208 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 PLEKHA8P1O95397 391 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 ITGB1P05556 798 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 SUPT20HL2P0C7V6 817 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 CKBP12277 381 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 GCSHP23434 173 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 NHLH2Q02577 135 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 WTAPQ15007 396 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 HSDL1Q3SXM5 330 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 MAP9Q49MG5 647 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 SWSAP1Q6NVH7 229 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 NFRKBQ6P4R8 1299 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 TBC1D15Q8TC07 691 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 DVL3Q92997 716 aaPredicted RBP8.37□□□□□ -1.07
LINC01088-207ENST00000511241 SCAMP4Q969E2 229 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 PGBD4Q96DM1 585 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 NT5C1BQ96P26 610 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 IWS1Q96ST2 819 aa8.37□□□□□ -1.07
LINC01088-207ENST00000511241 LRRC2Q9BYS8 371 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms