RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 EMSYQ7Z589 1322 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 FSD2A1L4K1 749 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 PIPSLA2A3N6 862 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 HIDE1A8MVS5 230 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 RSPH10B2B2RC85 870 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 GRM8O00222 908 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 SPDEFO95238 335 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 AMY1AP04745 511 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 HLA-DOAP06340 250 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 LDHCP07864 332 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 RSPH10BP0C881 870 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 SRGAP2BP0DMP2 458 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 ATP5JP18859 108 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 IRX6P78412 446 aaPredicted RBP6.25□□□□□ -1.41
GYPB-212ENST00000511198 SRSF5Q13243 272 aaKnown RBP6.25□□□□□ -1.41
GYPB-212ENST00000511198 UBXN2BQ14CS0 331 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 RARS2Q5T160 578 aaKnown RBP6.25□□□□□ -1.41
GYPB-212ENST00000511198 XRRA1Q6P2D8 792 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 CBARPQ8N350 705 aaPredicted RBP6.25□□□□□ -1.41
GYPB-212ENST00000511198 CNTD1Q8N815 330 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 TSPYL6Q8N831 410 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 OR6J1Q8NGC5 347 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 SEPT8Q92599 483 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 KAT2BQ92831 832 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 SUCLG2Q96I99 432 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 PRMT8Q9NR22 394 aaPredicted RBP6.25□□□□□ -1.41
GYPB-212ENST00000511198 IGSF9Q9P2J2 1179 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 TMX2Q9Y320 296 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 EPN1Q9Y6I3 576 aaPredicted RBP6.25□□□□□ -1.41
GYPB-212ENST00000511198 LRBAP50851 2863 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 ITPR2Q14571 2701 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 ACACAQ13085 2346 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 GREB1Q4ZG55 1949 aa6.25□□□□□ -1.41
GYPB-212ENST00000511198 DOPEY2Q9Y3R5 2298 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 ASB14A6NK59 587 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 N4BP1O75113 896 aaKnown RBP6.24□□□□□ -1.41
GYPB-212ENST00000511198 PRSS23O95084 383 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 POMCP01189 267 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 ZNF806P0C7X5 589 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 BMP5P22003 454 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 ADORA1P30542 326 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 GSTO1P78417 241 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 ATP8B2P98198 1209 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 MTM1Q13496 603 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 SIM2Q14190 667 aaPredicted RBP6.24□□□□□ -1.41
GYPB-212ENST00000511198 ATAT1Q5SQI0 421 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 BEND3Q5T5X7 828 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 TSHZ3Q63HK5 1081 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 B3GNTL1Q67FW5 361 aaPredicted RBP6.24□□□□□ -1.41
GYPB-212ENST00000511198 SEM1Q6ZVN7 128 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 CPXCR1Q8N123 301 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 TMEM132CQ8N3T6 1108 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 CCHCR1Q8TD31 782 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 ASB10Q8WXI3 467 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 LINC00476Q8WZB0 136 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 CYFIP2Q96F07 1278 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 FUBP3Q96I24 572 aaKnown RBP eCLIP6.24□□□□□ -1.41
GYPB-212ENST00000511198 PUS7LQ9H0K6 701 aaKnown RBP6.24□□□□□ -1.41
GYPB-212ENST00000511198 VCPKMTQ9H867 229 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 TMEM140Q9NV12 185 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 FBXO34Q9NWN3 711 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 AATFQ9NY61 560 aaKnown RBP eCLIP6.24□□□□□ -1.41
GYPB-212ENST00000511198 HDAC6Q9UBN7 1215 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 MCM8Q9UJA3 840 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 DNM3Q9UQ16 869 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 FOCADQ5VW36 1801 aa6.24□□□□□ -1.41
GYPB-212ENST00000511198 FRMPD2Q68DX3 1309 aaPredicted RBP6.24□□□□□ -1.41
GYPB-212ENST00000511198 KANSL1LA0AUZ9 987 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 CCDC78A2IDD5 438 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 FAM171A2A8MVW0 826 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 IGSF3O75054 1194 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 EGR2P11161 476 aaPredicted RBP6.23□□□□□ -1.41
GYPB-212ENST00000511198 CEACAM1P13688 526 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 GCSHP23434 173 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 SLC6A2P23975 617 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 OCA2Q04671 838 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 PLPP4Q5VZY2 271 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 ZNF529Q6P280 563 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 OLFML1Q6UWY5 402 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 ATF7IPQ6VMQ6 1270 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.23□□□□□ -1.41
GYPB-212ENST00000511198 ADGRA1Q86SQ6 560 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 ZNF575Q86XF7 245 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 CMTR2Q8IYT2 770 aaKnown RBP6.23□□□□□ -1.41
GYPB-212ENST00000511198 LCORLQ8N3X6 602 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 CASP10Q92851 521 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 COQ10AQ96MF6 247 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 DDX23Q9BUQ8 820 aaKnown RBP6.23□□□□□ -1.41
GYPB-212ENST00000511198 ARRDC1-AS1Q9H2J1 176 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 PNNQ9H307 717 aaKnown RBP6.23□□□□□ -1.41
GYPB-212ENST00000511198 SYNPO2LQ9H987 977 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 SERPINB13Q9UIV8 391 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 ATP8A1Q9Y2Q0 1164 aa6.23□□□□□ -1.41
GYPB-212ENST00000511198 PDS5AQ29RF7 1337 aaKnown RBP6.23□□□□□ -1.41
GYPB-212ENST00000511198 A0A1B0GTW7 788 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 C4orf47A7E2U8 309 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 ATP2A1O14983 1001 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 GPR32O75388 356 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 CD72P21854 359 aa6.22□□□□□ -1.41
GYPB-212ENST00000511198 THPOP40225 353 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms