RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 PTK2Q05397 1052 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 CT47A1Q5JQC4 288 aaPredicted RBP23.87■■□□□ 1.41
SNF8-209ENST00000510558 MPP7Q5T2T1 576 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 LYSMD4Q5XG99 296 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 RNF43Q68DV7 783 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 NADSYN1Q6IA69 706 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 PASD1Q8IV76 773 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 WDTC1Q8N5D0 677 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.87■■□□□ 1.41
SNF8-209ENST00000510558 SLC39A13Q96H72 371 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 POPDC2Q9HBU9 364 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 SAMSN1Q9NSI8 373 aaKnown RBP23.87■■□□□ 1.41
SNF8-209ENST00000510558 ABCB8Q9NUT2 735 aa23.87■■□□□ 1.41
SNF8-209ENST00000510558 KCNJ18B7U540 433 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 FOXN3O00409 490 aaPredicted RBP23.86■■□□□ 1.41
SNF8-209ENST00000510558 PNMA6AP0CW24 399 aaPredicted RBP23.86■■□□□ 1.41
SNF8-209ENST00000510558 PRKCHP24723 683 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 YWHAZP63104 245 aaKnown RBP23.86■■□□□ 1.41
SNF8-209ENST00000510558 KCNJ12Q14500 433 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 SERPINA13PQ6UXR4 307 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 CHST9Q7L1S5 443 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 WFDC5Q8TCV5 224 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 DDX1Q92499 740 aaKnown RBP23.86■■□□□ 1.41
SNF8-209ENST00000510558 PRICKLE1Q96MT3 831 aaPredicted RBP23.86■■□□□ 1.41
SNF8-209ENST00000510558 CPXM1Q96SM3 734 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 DDX50Q9BQ39 737 aaKnown RBP23.86■■□□□ 1.41
SNF8-209ENST00000510558 CD93Q9NPY3 652 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 GGA2Q9UJY4 613 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 NCOR2Q9Y618 2525 aa23.86■■□□□ 1.41
SNF8-209ENST00000510558 PES1O00541 588 aaKnown RBP23.85■■□□□ 1.41
SNF8-209ENST00000510558 SYNCRIPO60506 623 aaKnown RBP23.85■■□□□ 1.41
SNF8-209ENST00000510558 PABPC1P11940 636 aaKnown RBP23.85■■□□□ 1.41
SNF8-209ENST00000510558 PPM1JQ5JR12 505 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 DPY19L2P1Q6NXN4 242 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 KIAA0907Q7Z7F0 614 aaPredicted RBP23.85■■□□□ 1.41
SNF8-209ENST00000510558 SYT12Q8IV01 421 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 AHI1Q8N157 1196 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 DEFB119Q8N690 84 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 HJURPQ8NCD3 748 aaPredicted RBP23.85■■□□□ 1.41
SNF8-209ENST00000510558 PPP1R13BQ96KQ4 1090 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 GBP4Q96PP9 640 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 MKRN2Q9H000 416 aaKnown RBP23.85■■□□□ 1.41
SNF8-209ENST00000510558 LHX5Q9H2C1 402 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 PRDM16Q9HAZ2 1276 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 TMEM74BQ9NUR3 256 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 STIM2Q9P246 746 aa23.85■■□□□ 1.41
SNF8-209ENST00000510558 ATXN2Q99700 1313 aaKnown RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 CNOT1A5YKK6 2376 aaKnown RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 TM4SF5O14894 197 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 TRUB2O95900 331 aaKnown RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 MOCS2O96007 188 aaPredicted RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 EPHX1P07099 455 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 ITPKAP23677 461 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 CLCN1P35523 988 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 KRT9P35527 623 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 DPP6P42658 865 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 TAF5Q15542 800 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 TCP11X2Q5H9J9 407 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 ADIPOR2Q86V24 386 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 SLC47A2Q86VL8 602 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 FAM71AQ8IYT1 594 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 ZNF557Q8N988 423 aaPredicted RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 C1orf131Q8NDD1 294 aaKnown RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 CYB5D2Q8WUJ1 264 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 MYEOVQ96EZ4 313 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 NUCKS1Q9H1E3 243 aaKnown RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 EVLQ9UI08 416 aaPredicted RBP23.84■■□□□ 1.41
SNF8-209ENST00000510558 NFE2L3Q9Y4A8 694 aa23.84■■□□□ 1.41
SNF8-209ENST00000510558 TYW5A2RUC4 315 aaKnown RBP23.83■■□□□ 1.41
SNF8-209ENST00000510558 IGLV3-25P01717 112 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 APOEP02649 317 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 CD70P32970 193 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 PITX1P78337 314 aaPredicted RBP23.83■■□□□ 1.41
SNF8-209ENST00000510558 IRX4P78413 519 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 ZNF33AQ06730 810 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 KCNMA1Q12791 1236 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 FNDC3BQ53EP0 1204 aaKnown RBP23.83■■□□□ 1.41
SNF8-209ENST00000510558 TRIM61Q5EBN2 209 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 METTL3Q86U44 580 aaKnown RBP23.83■■□□□ 1.41
SNF8-209ENST00000510558 MFN1Q8IWA4 741 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 GPT2Q8TD30 523 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 NOX5Q96PH1 765 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 XPO7Q9UIA9 1087 aaKnown RBP23.83■■□□□ 1.41
SNF8-209ENST00000510558 PILRBQ9UKJ0 227 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 PLA2G4CQ9UP65 541 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 FHOD1Q9Y613 1164 aa23.83■■□□□ 1.41
SNF8-209ENST00000510558 GLI1P08151 1106 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 HLA-EP13747 358 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 KCNA4P22459 653 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 EEF1GP26641 437 aaKnown RBP23.82■■□□□ 1.4
SNF8-209ENST00000510558 HOXD12P35452 270 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 COPAP53621 1224 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 RPS24P62847 133 aaKnown RBP23.82■■□□□ 1.4
SNF8-209ENST00000510558 RAPGEF1Q13905 1077 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 DRAP1Q14919 205 aaPredicted RBP23.82■■□□□ 1.4
SNF8-209ENST00000510558 DCAF6Q58WW2 860 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 ZC3H12AQ5D1E8 599 aaKnown RBP23.82■■□□□ 1.4
SNF8-209ENST00000510558 MS4A13Q5J8X5 152 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 EFHC1Q5JVL4 640 aa23.82■■□□□ 1.4
SNF8-209ENST00000510558 PEAR1Q5VY43 1037 aaPredicted RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms