RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RNF103O00237 685 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 MFSD11O43934 449 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 SNNO75324 88 aaPredicted RBP18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 DAB1O75553 588 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 SMIM10L2AP0DMW4 78 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 RARBP10826 455 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 PGAM1P18669 254 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 AQP5P55064 265 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 SESN2P58004 480 aaPredicted RBP18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 ADIGQ0VDE8 80 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 NAB1Q13506 487 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 PDK1Q15118 436 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 DSTYKQ6XUX3 929 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 PIGZQ86VD9 579 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 TEX9Q8N6V9 391 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 RNF139Q8WU17 664 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 MIEF2Q96C03 454 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 P2RY11Q96G91 374 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 TINF2Q9BSI4 451 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 THAP1Q9NVV9 213 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 STOML1Q9UBI4 398 aa18.47■□□□□ 0.55
CCHCR1-228ENST00000509552 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 PTDSS1P48651 473 aaKnown RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 GLUD2P49448 558 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 CCDC6Q16204 474 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 KHDC1Q4VXA5 237 aaKnown RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 GPR142Q7Z601 462 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 B3GALNT2Q8NCR0 500 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 CCNYQ8ND76 341 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 SEPT10Q9P0V9 454 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 MARCOQ9UEW3 520 aaPredicted RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 STAP1Q9ULZ2 295 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 SLC45A1Q9Y2W3 748 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 GLRA3O75311 464 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 KCNE1P15382 129 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 MGAT1P26572 445 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 EPHX2P34913 555 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 NOS2P35228 1153 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 NIPAL4Q0D2K0 466 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 TBCCQ15814 346 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 PACS1Q6VY07 963 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 NME8Q8N427 588 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 RILPQ96NA2 401 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 HNRNPABQ99729 332 aaKnown RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 DUSP16Q9BY84 665 aa18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 ZNF395Q9H8N7 513 aaPredicted RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 HBS1LQ9Y450 684 aaKnown RBP18.46■□□□□ 0.55
CCHCR1-228ENST00000509552 SF3B1O75533 1304 aaKnown RBP eCLIP18.45■□□□□ 0.549e-7■■■■■ 57.4
CCHCR1-228ENST00000509552 SYNJ2BP-COX16A0A087WUM0 186 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 PGM1P36871 562 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 CRADDP78560 199 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 WASHC5Q12768 1159 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 TSNAXIP1Q2TAA8 658 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 FASTKD1Q53R41 847 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 BSPRYQ5W0U4 402 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 CES4AQ5XG92 561 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 TMPRSS6Q8IU80 811 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 UNC5BQ8IZJ1 945 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 KIRREL3Q8IZU9 778 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 STMN2Q93045 179 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 SIKE1Q9BRV8 207 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 XPNPEP3Q9NQH7 507 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 COX16Q9P0S2 106 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 DCDC2Q9UHG0 476 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 CAPN14A8MX76 684 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 B2RBV5 119 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 DYNC1LI2O43237 492 aaPredicted RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 CREB3O43889 395 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 ENO1P06733 434 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 TKTP29401 623 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 IRX4P78413 519 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 IFRD2Q12894 506 aaPredicted RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 KPNB1Q14974 876 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 DPY19L2Q6NUT2 758 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 LIMS2Q7Z4I7 341 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 WDR75Q8IWA0 830 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 NDRG1Q92597 394 aaKnown RBP18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 GOLGA2P5Q9HBQ8 144 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 LRRC4Q9HBW1 653 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 TXNDC16Q9P2K2 825 aa18.45■□□□□ 0.54
CCHCR1-228ENST00000509552 BTBD19C9JJ37 291 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 M0QYT0 321 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 ZNF189O75820 626 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 WARSP23381 471 aaKnown RBP18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 PDE1BQ01064 536 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 GRB14Q14449 540 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 HSF5Q4G112 596 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 ZCCHC23Q6ZST2 131 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 SIX6OS1Q8N1H7 587 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 TOP6BLQ8N6T0 577 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 TAGLN3Q9UI15 199 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 MBLAC1A4D2B0 266 aaPredicted RBP18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 SPECC1L-ADORA2AF8WAN1 911 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 TPP1O14773 563 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 POLBP06746 335 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 NPR3P17342 541 aa18.44■□□□□ 0.54
CCHCR1-228ENST00000509552 PSMB4P28070 264 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms