RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 SNX30Q5VWJ9 437 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 FAM109BQ6ICB4 259 aaPredicted RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 EMBQ6PCB8 327 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 DARS2Q6PI48 645 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 CCDC149Q6ZUS6 474 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ITIH5Q86UX2 942 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ZC3H18Q86VM9 953 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 RSAD2Q8WXG1 361 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 FCRL2Q96LA5 508 aaPredicted RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 NACA2Q9H009 215 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 CCSER2Q9H7U1 834 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ETNK2Q9NVF9 386 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 OR12D3Q9UGF7 316 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 NEU2Q9Y3R4 380 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SNX10Q9Y5X0 201 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 MYO16Q9Y6X6 1858 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SLC12A8A0AV02 714 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ZNF840PA6NDX5 716 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 HIDE1A8MVS5 230 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 PAGE1O75459 146 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 GLUD1P00367 558 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 IFNB1P01574 187 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 DNAJB1P25685 340 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ECHS1P30084 290 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 GGCXP38435 758 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ADCY8P40145 1251 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 PPP3CCP48454 512 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 VPS41P49754 854 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 KPNA1P52294 538 aaPredicted RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 GBE1Q04446 702 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 CALCOCO2Q13137 446 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 HECTD3Q5T447 861 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 LILRA6Q6PI73 481 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 DNAJB7Q7Z6W7 309 aaPredicted RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 MRPL43Q8N983 215 aaKnown RBP13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 MICAL1Q8TDZ2 1067 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SIK2Q9H0K1 926 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 C10orf88Q9H8K7 445 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 PCDH9Q9HC56 1237 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 GRHL1Q9NZI5 618 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 SLC12A6Q9UHW9 1150 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 ASB3Q9Y575 518 aa13.03□□□□□ -0.32
LYSMD3-204ENST00000509384 CFAP69A5D8W1 941 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 KCNU1A8MYU2 1149 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 DCLK1O15075 740 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 MFSD11O43934 449 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 LRIG2O94898 1065 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 MAP3K6O95382 1288 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 LRG1P02750 347 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 C8AP07357 584 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 HMBSP08397 361 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 ERCC2P18074 760 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 EPHB2P29323 1055 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 HTR7P34969 479 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 ATP5C1P36542 298 aaKnown RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 TUBP50607 506 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 PDZD4Q76G19 769 aaPredicted RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 ZNF771Q7L3S4 317 aaPredicted RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 SPRED2Q7Z698 418 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 CDKL3Q8IVW4 592 aaPredicted RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 ZNF276Q8N554 614 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 ATP6V0D2Q8N8Y2 350 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 CAVIN3Q969G5 261 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 SNF8Q96H20 258 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 GDAP1L1Q96MZ0 367 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 TGS1Q96RS0 853 aaKnown RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 FAM129AQ9BZQ8 928 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 NEUROG2Q9H2A3 272 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 MED4Q9NPJ6 270 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 DTLQ9NZJ0 730 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 WHRNQ9P202 907 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 XPO7Q9UIA9 1087 aaKnown RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 HBS1LQ9Y450 684 aaKnown RBP13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 PCDHA11Q9Y5I1 949 aa13.02□□□□□ -0.33
LYSMD3-204ENST00000509384 GRM6O15303 877 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 IGLV3-27P01718 113 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 FAM153BP0C7A2 387 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 ZSCAN5DPP0CG00 497 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 SRGAP2BP0DMP2 458 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 STIP1P31948 543 aaKnown RBP13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 PLTPP55058 493 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 GDF10P55107 478 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 RING1Q06587 406 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 XRCC4Q13426 336 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 PAFAH1B3Q15102 231 aaKnown RBP13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 FAM153CQ494X1 144 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 RWDD4Q6NW29 188 aaKnown RBP13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 KLHDC10Q6PID8 442 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 PRUNE1Q86TP1 453 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 UNC45BQ8IWX7 931 aa13.01□□□□□ -0.33
LYSMD3-204ENST00000509384 ELMOD1Q8N336 334 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms