RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 SLC9A1P19634 815 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 HOXD9P28356 352 aaPredicted RBP11.38□□□□□ -0.59
RNF4-212ENST00000509258 SLC6A4P31645 630 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 IL12RB1P42701 662 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 SLC14A1Q13336 389 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 CNGA2Q16280 664 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 ZNF423Q2M1K9 1284 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 WDR45BQ5MNZ6 344 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 NADSYN1Q6IA69 706 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 MSANTD2Q6P1R3 559 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 KIAA1324Q6UXG2 1013 aaKnown RBP11.38□□□□□ -0.59
RNF4-212ENST00000509258 RGL4Q8IZJ4 473 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 GTPBP4Q9BZE4 634 aaKnown RBP11.38□□□□□ -0.59
RNF4-212ENST00000509258 SIX2Q9NPC8 291 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 HESX1Q9UBX0 185 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 KLK13Q9UKR3 277 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 SLC27A6Q9Y2P4 619 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 PLXNA2O75051 1894 aa11.38□□□□□ -0.59
RNF4-212ENST00000509258 DOCK4Q8N1I0 1966 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 CABIN1Q9Y6J0 2220 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 ANKRD11Q6UB99 2663 aaPredicted RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 SRRM3A6NNA2 597 aaPredicted RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 P4HA2O15460 535 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 PNMA6AP0CW24 399 aaPredicted RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 PRKCHP24723 683 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 PPP1R2P41236 205 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 GPD2P43304 727 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 RPL34P49207 117 aaKnown RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 UBE2HP62256 183 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 YWHAEP62258 255 aaKnown RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 PITX1P78337 314 aaPredicted RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 GCNT1Q02742 428 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 ARID5AQ03989 594 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 PLEKHG6Q3KR16 790 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 FAM133BQ5BKY9 247 aaKnown RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 SIX6OS1Q8N1H7 587 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 SCML4Q8N228 414 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 CPXM2Q8N436 756 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 PLD4Q96BZ4 506 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 ZNF419Q96HQ0 510 aaPredicted RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 IPO9Q96P70 1041 aaKnown RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 ZDHHC5Q9C0B5 715 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 MIS12Q9H081 205 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 UBE2TQ9NPD8 197 aaPredicted RBP11.37□□□□□ -0.59
RNF4-212ENST00000509258 CNGB3Q9NQW8 809 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 RWDD2AQ9UIY3 292 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 NFE2L3Q9Y4A8 694 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.37□□□□□ -0.59
RNF4-212ENST00000509258 STON1Q9Y6Q2 735 aa11.37□□□□□ -0.59
RNF4-212ENST00000509258 MEI4A8MW99 385 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 SYNCRIPO60506 623 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 KRT5P13647 590 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 CD59P13987 128 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 CD6P30203 668 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 HLA-FP30511 346 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 ZNF445P59923 1031 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 ENPP2Q13822 863 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 EIF4HQ15056 248 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 DPCR1Q3MIW9 517 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 FUT11Q495W5 492 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 RFWD3Q6PCD5 774 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 TRIM65Q6PJ69 517 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 METTL3Q86U44 580 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 WDTC1Q8N5D0 677 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 ZNF366Q8N895 744 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 OR2I1PQ8NGU4 316 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 FCRL2Q96LA5 508 aaPredicted RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 PRICKLE1Q96MT3 831 aaPredicted RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 MKRN2Q9H000 416 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 OLA1Q9NTK5 396 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 CHMP5Q9NZZ3 219 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 THAP10Q9P2Z0 257 aaPredicted RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 XPO7Q9UIA9 1087 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 STOML2Q9UJZ1 356 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 NAALADL1Q9UQQ1 740 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 HBS1LQ9Y450 684 aaKnown RBP11.36□□□□□ -0.59
RNF4-212ENST00000509258 FREM2Q5SZK8 3169 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 BAHCC1Q9P281 2608 aa11.36□□□□□ -0.59
RNF4-212ENST00000509258 FAM170AA1A519 330 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 FAM221BA6H8Z2 402 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 KCNJ18B7U540 433 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 PAPSS1O43252 624 aaPredicted RBP11.35□□□□□ -0.59
RNF4-212ENST00000509258 GJB3O75712 270 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 GNA14O95837 355 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 LTFP02788 710 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 ACADMP11310 421 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 HLA-EP13747 358 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 OXTRP30559 389 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 FAM193AP78312 1265 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 GRIK2Q13002 908 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 ZNF234Q14588 700 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 TAF5Q15542 800 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 ARHGAP44Q17R89 818 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 HSP90AA4PQ58FG1 418 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 SYPL2Q5VXT5 272 aa11.35□□□□□ -0.59
RNF4-212ENST00000509258 ANKS1BQ7Z6G8 1248 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms